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Nucleic atom dist Protein atom
DT5:T.OP1/1 3.03 ASN572:A.ND2/1
DG7:T.OP1/1 2.98 GLY393:A.N/1
DC8:T.OP1/1 3.17 LYS705:A.NZ/1
DC11:T.OP2/1 3.05 LYS878:A.NZ/1
DG13:T.OP1/1 2.96 LYS844:A.NZ/1
DC14:T.OP1/1 3.05 LYS800:A.N/1
DC110:P.OP1/1 3.42 LYS790:A.NZ/1
DC110:P.OP1/1 3.09 TYR791:A.OH/1
DG111:P.OP1/1 3 HIS804:A.NE2/1
DG111:P.OP2/1 2.99 ASN786:A.ND2/1
DG112:P.OP2/1 2.88 SER784:A.OG/1
DC113:P.OP1/1 2.64 SER735:A.N/1
DC113:P.OP1/1 2.73 SER735:A.OG/1
DC113:P.OP2/1 2.4 ASN284:A.ND2/1
DG114:P.OP1/1 2.59 GLY729:A.N/1
DG114:P.N3/1 3.22 LYS706:A.NZ/1
2DA115:P.OP1/1 2.62 TYR708:A.OH/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC3:T.O2/1 2.59 110:T/1 2.84 ASN572:A.ND2/1
DC6:T.OP1/1 2.46 253:T/1 2.84 GLN389:A.O/1
DC6:T.OP1/1 2.67 1124:A/1 3.42 TYR391:A.N/1
DC6:T.O2/1 2.85 100:T/1 2.96 ALA394:A.N/1
DC8:T.OP1/1 2.72 19:T/1 2.8 VAL396:A.N/1
DC8:T.OP1/1 2.72 19:T/1 3.18 VAL396:A.O/1
DC9:T.OP1/1 2.71 1024:A/1 2.55 GLU398:A.OE2/1
DC9:T.OP1/1 2.71 1024:A/1 2.73 LYS705:A.N/1
DG13:T.OP1/1 2.83 1069:A/1 2.67 CYS801:A.O/1
DG13:T.OP1/1 2.83 1069:A/1 2.83 ARG806:A.NE/1
DG114:P.OP1/1 2.88 67:P/1 3.12 GLN733:A.NE2/1
DG114:P.OP2/1 2.79 67:P/1 3.12 GLN733:A.NE2/1
DG114:P.N2/1 2.95 1115:A/1 2.8 LYS706:A.NZ/1
2DA115:P.OP1/1 2.65 999:A/1 2.72 TYR619:A.OH/1
2DA115:P.OP1/1 2.65 999:A/1 2.59 ASP621:A.OD2/1
2DA115:P.OP1/1 2.77 1005:A/1 2.86 SER624:A.OG/1
2DA115:P.OP1/1 2.77 1005:A/1 2.67 TYR626:A.OH/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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