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Nucleic atom dist Protein atom
DC4:T.OP1/1 2.8 LYS521:A.NZ/1
DT5:T.OP1/1 2.96 ARG514:A.NH2/1
DT5:T.OP2/1 2.83 ARG514:A.NE/1
DT5:T.O2/1 2.93 ARG517:A.NH1/1
DG6:T.OP2/1 2.67 LYS521:A.NZ/1
DG6:T.N2/1 3.04 TYR505:A.OH/1
DA8:T.OP1/1 2.84 HIS530:A.NE2/1
DC9:T.OP1/1 3.34 GLU470:A.N/1
DT4:P.OP1/1 2.75 GLY345:A.N/1
DT4:P.OP1/1 2.87 THR348:A.N/1
DT4:P.OP1/1 2.64 THR348:A.OG1/1
DT4:P.OP2/1 3.04 LYS347:A.N/1
DA5:P.OP1/1 2.71 GLY343:A.N/1
A7:P.OP1/1 2.72 TYR505:A.OH/1
A7:P.OP2/1 2.74 LYS472:A.NZ/1
A7:P.N3/1 3.12 ASN513:A.ND2/1
DG1:D.OP1/1 3.1 TYR279:A.OH/1
DG1:D.OP2/1 2.87 ARG275:A.NE/1
DC2:D.OP1/1 2.99 GLY306:A.N/1
DC2:D.OP1/1 2.89 MET309:A.N/1
DC3:D.OP1/1 2.79 GLY304:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT5:T.OP2/1 2.86 600:A/1 2.76 LYS281:A.NZ/1
DG6:T.OP1/1 2.69 126:T/1 2.86 ARG517:A.O/1
DG6:T.OP1/1 2.69 126:T/1 2.91 LEU527:A.N/1
DG6:T.N2/1 3.01 41:A/1 3 ARG517:A.NH1/1
DG6:T.N2/1 3.01 41:A/1 2.65 GLU529:A.OE1/1
DG6:T.N3/1 3.05 41:A/1 3 ARG517:A.NH1/1
DG6:T.N3/1 3.05 41:A/1 2.65 GLU529:A.OE1/1
DT7:T.OP1/1 2.83 44:A/1 2.79 SER526:A.OG/1
DT7:T.OP1/1 2.56 156:T/1 2.77 SER528:A.OG/1
DT7:T.O2/1 3.11 110:A/1 2.74 GLU529:A.OE2/1
DC9:T.OP1/1 2.63 116:T/1 3.09 THR471:A.N/1
DT10:T.OP1/1 2.53 263:T/1 2.87 LYS463:A.N/1
DT10:T.OP1/1 2.54 141:T/1 2.66 LYS463:A.O/1
DT10:T.O4'/1 3.16 29:A/1 2.93 GLN372:A.NE2/1
DG11:T.OP1/1 2.4 264:T/1 2.99 THR371:A.N/1
DG11:T.OP1/1 2.88 30:T/1 3.03 GLN372:A.N/1
DA5:P.OP2/1 2.83 16:P/1 3.13 SER339:A.O/1
DC6:P.O3'/1 3.01 593:A/1 2.66 ASP490:A.OD2/1
A7:P.OP2/1 3.21 580:A/1 2.77 ASP429:A.OD1/1
A7:P.OP2/1 3.21 580:A/1 3.01 ASP490:A.OD2/1
A7:P.O3'/1 2.71 212:A/1 2.56 ASP427:A.OD2/1
A7:P.O3'/1 2.51 238:P/1 2.76 PHE506:A.O/1
A7:P.O2'/1 2.79 192:P/1 2.81 ARG420:A.NH1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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