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Nucleic atom dist Protein atom
DC2:C.OP1/1 2.98 ARG36:A.NH1/1
DC4:C.OP1/1 2.79 GLY41:A.N/1
DC4:C.OP2/1 2.8 ARG331:A.NH2/1
DG6:C.OP2/1 2.55 THR250:A.OG1/1
DG6:C.OP2/1 3.18 ARG332:A.NE/1
DG6:C.OP2/1 3.29 ARG332:A.NH2/1
DG6:C.N2/1 2.69 ARG332:A.NH1/1
DG6:C.N3/1 3.42 ARG332:A.NH2/1
DA7:C.OP1/1 3.22 LYS275:A.NZ/1
DA7:C.OP2/1 2.7 ILE248:A.N/1
DA8:C.OP2/1 2.88 GLY246:A.N/1
DA8:C.OP2/1 2.6 ARG336:A.NH2/1
DA8:C.O5'/1 2.74 ARG336:A.NH2/1
DT9:C.OP1/1 2.58 LYS243:A.N/1
DT9:C.OP2/1 2.93 SER244:A.N/1
DT9:C.OP2/1 2.67 SER244:A.OG/1
DT12:C.OP1/1 2.77 ALA220:A.N/1
DA6:D.OP2/1 2.89 THR301:A.OG1/1
DA6:D.O3'/1 3.33 GLY299:A.N/1
DA7:D.OP2/1 3.3 GLY299:A.N/1
DG8:D.OP2/1 2.84 SER297:A.N/1
DT11:D.OP1/1 2.79 GLY187:A.N/1
DT11:D.OP1/1 3.23 THR190:A.N/1
DT11:D.OP1/1 2.48 THR190:A.OG1/1
DT11:D.OP2/1 3.23 ILE189:A.N/1
DT12:D.OP1/1 2.81 GLY185:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG6:C.OP1/1 2.66 108:C/1 2.99 PHE33:A.O/1
DG6:C.OP1/1 2.93 115:C/1 3.03 SER34:A.O/1
DG6:C.OP1/1 2.93 115:C/1 3.24 THR250:A.N/1
DA7:C.OP2/1 2.86 104:C/1 3.1 ARG336:A.NH1/1
DA8:C.OP1/1 2.62 110:C/1 2.75 LYS275:A.NZ/1
DA6:D.OP2/1 2.96 602:A/1 2.94 LYS339:A.NZ/1
DA7:D.OP2/1 2.7 207:D/1 2.86 GLY299:A.O/1
DG8:D.OP1/1 2.64 206:D/1 2.82 ARG298:A.NH1/1
DG8:D.OP1/1 2.64 206:D/1 2.74 ARG298:A.NH2/1
DA10:D.N3/1 2.81 607:A/1 2.78 LYS221:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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