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Nucleic atom dist Protein atom
DA6:P.OP2/1 2.7 LYS339:A.NZ/1
DA7:P.OP2/1 3.12 THR301:A.N/1
DG8:P.OP2/1 2.9 GLY299:A.N/1
DG9:P.OP2/1 3.17 SER297:A.N/1
DT11:P.OP1/1 3.29 LYS193:A.NZ/1
DT12:P.OP1/1 3.14 GLY187:A.N/1
DT12:P.OP1/1 2.84 THR190:A.OG1/1
DC13:P.OP1/1 2.99 GLY185:A.N/1
2DT14:P.OP1/1 3.28 GLU106:A.OE2/1
DT1:B.O5'/1 2.86 ARG36:A.O/1
DT1:B.O5'/1 2.96 LYS252:A.O/1
DC4:B.OP1/1 2.83 GLY41:A.N/1
DG6:B.OP2/1 2.5 THR250:A.OG1/1
DG6:B.OP2/1 2.54 ARG332:A.NE/1
DA7:B.OP2/1 2.83 ILE248:A.N/1
DA8:B.OP1/1 3.22 LYS275:A.NZ/1
DA8:B.OP2/1 3.07 GLY246:A.N/1
DA8:B.OP2/1 3.17 LYS275:A.NZ/1
DA8:B.OP2/1 2.43 ARG336:A.NH2/1
DT9:B.OP1/1 2.63 LYS243:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT12:P.OP2/1 2.67 202:P/1 3.27 ASN188:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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