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Nucleic atom dist Protein atom
DA3:C.OP2/1 3.05 GLY273:A.N/1
DA3:C.N7/1 2.91 SER272:A.OG/1
DG4:C.N7/1 3 LYS274:A.N/1
DG4:C.O6/1 2.9 ASN275:A.OD1/1
DA5:C.N6/1 2.79 LYS274:A.O/1
DG7:C.N7/1 3 ARG114:A.NE/1
DG7:C.O6/1 2.76 ARG114:A.NH2/1
DG9:C.OP1/1 2.57 TYR95:A.OH/1
DC18:D.OP2/1 3.38 LYS268:A.NZ/1
DC18:D.O3'/1 2.81 ARG254:A.NH1/1
DA19:D.OP1/1 2.75 ARG254:A.NH1/1
DA19:D.OP1/1 2.7 TYR280:A.OH/1
DA19:D.OP2/1 2.64 THR278:A.OG1/1
DG21:D.OP1/1 2.84 LYS60:A.NZ/1
DG21:D.OP2/1 2.94 ASN173:A.N/1
DG21:D.OP2/1 3.04 ARG277:A.NH2/1
DT22:D.OP2/1 2.81 LYS60:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA3:C.OP2/1 2.68 255:C/1 2.82 LYS276:A.NZ/1
DG7:C.O5'/1 2.8 168:C/1 2.78 ARG114:A.O/1
DG7:C.O4'/1 2.61 168:C/1 2.78 ARG114:A.O/1
DT8:C.OP1/1 3.05 406:A/1 2.8 ARG97:A.NH1/1
DT8:C.OP1/1 3.05 406:A/1 2.82 ARG97:A.NH2/1
DG9:C.OP1/1 2.87 334:A/1 2.51 LYS94:A.NZ/1
DA19:D.OP2/1 2.95 383:A/1 3.25 ASN173:A.ND2/1
DA19:D.OP2/1 2.95 383:A/1 2.92 THR278:A.N/1
DA19:D.N3/1 3.02 504:A/1 3.1 ARG114:A.NH1/1
DG21:D.N2/1 3.14 327:A/1 2.75 PHE116:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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