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Nucleic atom dist Protein atom
DA3:E.OP2/1 2.88 GLY273:B.N/1
DA3:E.N7/1 3.21 SER272:B.OG/1
DG4:E.N7/1 2.98 LYS274:B.N/1
DG4:E.O6/1 2.89 ASN275:B.OD1/1
DA5:E.N6/1 3.26 LYS274:B.O/1
DG7:E.N7/1 3.11 ARG114:B.NE/1
DG7:E.O6/1 2.82 ARG114:B.NH2/1
DG9:E.OP1/1 2.59 TYR95:B.OH/1
DC18:F.OP2/1 3.16 LYS268:B.NZ/1
DC18:F.O3'/1 3.12 ARG254:B.NH1/1
DA19:F.OP1/1 2.97 ARG254:B.NH1/1
DA19:F.OP1/1 2.69 TYR280:B.OH/1
DA19:F.OP2/1 2.82 THR278:B.OG1/1
DG21:F.OP1/1 2.77 LYS60:B.NZ/1
DG21:F.OP2/1 2.99 ASN173:B.N/1
DG21:F.OP2/1 2.84 ARG277:B.NH2/1
DT22:F.OP2/1 2.85 LYS60:B.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA3:E.OP2/1 2.63 155:E/1 2.82 LYS276:B.NZ/1
DG7:E.O5'/1 2.98 482:B/1 2.75 ARG114:B.O/1
DG7:E.O4'/1 2.74 482:B/1 2.75 ARG114:B.O/1
DT8:E.OP1/1 2.63 348:E/1 3.49 ASN115:B.ND2/1
DA19:F.OP2/1 2.83 303:B/1 3.26 ASN173:B.ND2/1
DA19:F.OP2/1 2.83 303:B/1 2.76 THR278:B.N/1
DG21:F.N2/1 2.94 372:B/1 2.79 PHE116:B.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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