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Nucleic atom dist Protein atom
DC8:B.OP1/1 2.83 ARG109:A.N/1
DC8:B.OP2/1 3.12 LYS108:A.N/1
5CM9:B.OP1/1 2.55 SER107:A.OG/1
DG10:B.N7/1 2.98 ARG106:A.NH2/1
DG10:B.O6/1 2.93 ARG106:A.NH1/1
DC3:C.OP2/1 2.77 LYS82:A.NZ/1
DT4:C.OP1/1 2.85 LEU85:A.N/1
DT4:C.OP1/1 3.07 SER86:A.N/1
DT4:C.OP1/1 3.1 SER86:A.OG/1
DT4:C.O4/1 3.13 ARG106:A.NH1/1
DG5:C.OP1/1 2.91 LYS88:A.N/1
DG5:C.OP2/1 2.98 THR89:A.N/1
DG5:C.OP2/1 2.7 THR89:A.OG1/1
DG5:C.N7/1 2.88 ARG84:A.NH1/1
DG5:C.O6/1 2.86 ARG84:A.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC8:B.OP2/1 2.83 206:B/1 2.84 ARG106:A.O/1
5CM9:B.OP2/1 2.8 210:B/1 3.05 ARG109:A.NH2/1
DG1:C.O5'/1 2.82 236:C/1 2.97 LYS104:A.NZ/1
DT2:C.OP1/1 2.83 309:A/1 2.78 LYS82:A.NZ/1
DT2:C.OP1/1 2.86 312:A/1 2.6 TYR96:A.OH/1
DT2:C.OP2/1 2.79 308:A/1 2.77 TYR96:A.OH/1
DT2:C.OP2/1 2.63 236:C/1 2.97 LYS104:A.NZ/1
DC3:C.N4/1 3.21 313:A/1 2.92 LYS104:A.NZ/1

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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