|
Nucleic atom
|
dist
|
Protein atom
|
|
DA7:I.O3'/1
|
2.93
|
ARG49:E.NH1/1
|
|
DA19:I.OP1/1
|
2.7
|
SER56:D.N/1
|
|
DA19:I.OP1/1
|
2.86
|
SER56:D.OG/1
|
|
DA19:I.OP2/1
|
3.02
|
SER56:D.OG/1
|
|
DT20:I.OP1/1
|
3.23
|
ILE54:D.N/1
|
|
DA27:I.O3'/1
|
3.33
|
ARG33:D.NH1/1
|
|
DA29:I.OP1/1
|
2.64
|
ARG32:C.NH1/1
|
|
DA30:I.OP1/1
|
2.83
|
ARG17:C.N/1
|
|
DA30:I.OP2/1
|
2.76
|
ARG17:C.NE/1
|
|
DG31:I.OP1/1
|
2.96
|
LYS15:C.N/1
|
|
DG31:I.OP1/1
|
3.1
|
ARG20:C.NH1/1
|
|
DG31:I.OP2/1
|
2.76
|
ARG20:C.NH2/1
|
|
DG39:I.OP1/1
|
2.82
|
THR88:D.OG1/1
|
|
DC50:I.OP1/1
|
2.69
|
ARG72:A.NH2/1
|
|
DG59:I.O3'/1
|
2.57
|
ARG63:A.NH1/1
|
|
DC60:I.OP1/1
|
2.79
|
ARG63:A.NH2/1
|
|
DC60:I.OP1/1
|
2.55
|
ARG36:B.NH2/1
|
|
DG68:I.OP1/1
|
2.4
|
ARG42:A.NE/1
|
|
DG68:I.OP2/1
|
2.54
|
ARG42:A.NH2/1
|
|
DT70:I.OP1/1
|
2.69
|
VAL117:A.N/1
|
|
DT70:I.OP1/1
|
2.86
|
THR118:A.N/1
|
|
DT70:I.OP1/1
|
3.21
|
THR118:A.OG1/1
|
|
DG81:I.OP1/1
|
2.61
|
ILE46:F.N/1
|
|
DG81:I.OP1/1
|
3.25
|
ILE46:F.O/1
|
|
DA82:I.OP1/1
|
2.96
|
GLY44:E.N/1
|
|
DA82:I.OP1/1
|
3
|
ALA47:E.N/1
|
|
DA82:I.N3/1
|
3.05
|
ARG40:E.NH2/1
|
|
DA83:I.OP1/1
|
2.78
|
TYR41:E.N/1
|
|
DT90:I.OP2/1
|
2.17
|
ARG69:E.NH2/1
|
|
DT91:I.OP1/1
|
2.57
|
LYS64:E.N/1
|
|
DC101:I.OP1/1
|
2.9
|
LYS79:F.N/1
|
|
DC101:I.OP1/1
|
2.86
|
THR80:F.N/1
|
|
DC101:I.OP1/1
|
2.94
|
THR80:F.OG1/1
|
|
DG103:I.OP1/1
|
2.36
|
SER32:D.OG/1
|
|
DA111:I.OP1/1
|
3.03
|
ALA45:G.N/1
|
|
DT112:I.OP1/1
|
3
|
VAL43:G.N/1
|
|
DG121:I.O3'/1
|
3.02
|
ARG29:G.NH2/1
|
|
DG122:I.OP1/1
|
3.38
|
ARG29:G.NH1/1
|
|
DG122:I.OP1/1
|
2.97
|
SER36:H.N/1
|
|
DG122:I.OP1/1
|
3.22
|
SER36:H.O/1
|
|
DT123:I.OP1/1
|
2.65
|
LYS34:H.N/1
|
|
DG131:I.OP1/1
|
3.25
|
THR76:G.N/1
|
|
DG131:I.OP1/1
|
3
|
ARG77:G.N/1
|
|
DT143:I.OP1/1
|
2.84
|
ARG42:A.N/1
|
|
DT143:I.OP1/1
|
2.89
|
THR45:A.OG1/1
|
|
DA176:J.OP1/1
|
3.08
|
ARG32:G.NH2/1
|
|
DA176:J.OP2/1
|
2.9
|
ARG32:G.NE/1
|
|
DG177:J.OP1/1
|
2.93
|
ARG17:G.N/1
|
|
DG177:J.OP2/1
|
2.86
|
ARG17:G.NE/1
|
|
DT178:J.OP2/1
|
2.79
|
ARG20:G.NH2/1
|
|
DG185:J.O4'/1
|
3.15
|
ARG42:G.NH2/1
|
|
DG186:J.OP1/1
|
3.03
|
SER87:H.N/1
|
|
DG186:J.OP1/1
|
3.17
|
THR88:H.N/1
|
|
DA187:J.OP2/1
|
2.51
|
ARG86:H.NH2/1
|
|
DT194:J.OP1/1
|
2.61
|
ARG31:D.NH1/1
|
|
DC196:J.OP2/1
|
3.45
|
SER86:E.N/1
|
|
DA197:J.OP1/1
|
2.73
|
ARG72:E.NH1/1
|
|
DA197:J.OP1/1
|
2.69
|
PHE84:E.N/1
|
|
DA197:J.OP2/1
|
2.76
|
ARG72:E.NH2/1
|
|
DA207:J.OP2/1
|
3.09
|
ARG36:F.NH1/1
|
|
DC215:J.OP1/1
|
2.71
|
ARG42:E.NE/1
|
|
DC215:J.OP1/1
|
2.81
|
ARG42:E.NH2/1
|
|
DG217:J.OP1/1
|
2.57
|
VAL117:E.N/1
|
|
DG217:J.OP1/1
|
2.68
|
THR118:E.N/1
|
|
DG217:J.OP1/1
|
3.09
|
THR118:E.OG1/1
|
|
DA228:J.OP1/1
|
2.49
|
ILE46:B.N/1
|
|
DA229:J.OP1/1
|
3.06
|
GLY44:A.N/1
|
|
DA229:J.OP1/1
|
2.97
|
VAL46:A.N/1
|
|
DA229:J.OP1/1
|
3.07
|
ALA47:A.N/1
|
|
DA229:J.N3/1
|
2.7
|
ARG40:A.NH2/1
|
|
DC230:J.OP1/1
|
3.05
|
TYR41:A.N/1
|
|
DT237:J.OP1/1
|
2.98
|
ARG69:A.NH2/1
|
|
DT238:J.OP1/1
|
3.24
|
LYS64:A.N/1
|
|
DT238:J.OP2/1
|
3.22
|
LEU65:A.N/1
|
|
DA248:J.OP1/1
|
2.73
|
LYS79:B.N/1
|
|
DA248:J.OP1/1
|
2.58
|
THR80:B.N/1
|
|
DT258:J.OP1/1
|
3.09
|
ALA45:C.N/1
|
|
DA259:J.OP1/1
|
2.73
|
VAL43:C.N/1
|
|
DA259:J.O4'/1
|
3.14
|
ARG42:C.NH2/1
|
|
DG268:J.OP1/1
|
2.73
|
TYR40:D.OH/1
|
|
DT269:J.OP1/1
|
2.89
|
ARG29:C.NH2/1
|
|
DA270:J.OP1/1
|
2.61
|
LYS34:D.N/1
|
|
DC278:J.OP1/1
|
2.89
|
ARG77:C.N/1
|
|
DC278:J.OP2/1
|
2.9
|
THR76:C.N/1
|
|
DG290:J.OP1/1
|
2.92
|
ARG42:E.N/1
|
|
DG290:J.OP1/1
|
2.9
|
THR45:E.OG1/1
|
|
|
Hbonds:
Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
Protein atom is atom of protein in Jmol/RasMol format.
Dist is distance from nucleic atom to protein atom in angstroms (Å).
W-Bridges:
W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
Protein atom is atom of protein in Jmol/RasMol format.
Water is water molecule.
d_n2w is distance from nucleic atom to water molecule (Å).
d_p2w is distance from protein atom to water molecule (Å).
CluD:
CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
Core number is serial number of cluster.
Atoms is number of detected atoms in the cluster.
