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Nucleic atom dist Protein atom
DC502:C.OP2/1 2.43 LYS34:B.N/1
DA503:C.OP1/1 3.03 LYS116:B.NZ/1
DA503:C.N7/1 2.4 TYR33:B.OH/1
DA503:C.N6/1 3.08 TYR33:B.OH/1
DA504:C.OP2/1 3.21 ILE81:B.N/1
DA504:C.N7/1 2.91 GLN38:B.NE2/1
DA504:C.N6/1 3.06 GLN38:B.OE1/1
DG508:C.N7/1 3.11 ARG68:B.NH1/1
DG508:C.O6/1 2.42 ARG68:B.NH2/1
DT509:C.O4/1 3.24 ARG70:B.NH1/1
DA514:C.OP1/1 2.76 ASP20:A.OD2/1
DA514:C.OP1/1 3.08 GLN47:A.NE2/1
DA514:C.OP2/1 2.81 LYS48:A.N/1
DA514:C.OP2/1 2.62 ARG51:A.NH2/1
DG515:D.OP2/1 2.75 GLY19:A.O/1
DG515:D.N7/1 3.3 ARG70:A.NH2/1
DG515:D.O6/1 2.84 ARG70:A.NH1/1
DA516:D.OP1/1 2.86 ASP137:A.N/1
DA516:D.OP2/1 2.68 SER22:A.OG/1
DA516:D.OP2/1 3.25 LYS98:A.NZ/1
DA516:D.N7/1 3.04 GLN44:A.OE1/1
DC517:D.OP1/1 2.68 SER138:A.OG/1
DC517:D.OP2/1 2.95 ASN136:A.ND2/1
DA518:D.OP1/1 2.71 LYS142:A.N/1
DA518:D.OP1/1 2.94 THR143:A.N/1
DA518:D.OP2/1 3.06 GLN26:A.OE1/1
DA518:D.N7/1 3.07 GLN26:A.OE1/1
DG519:D.O6/1 2.79 LYS28:A.NZ/1
DC602:E.OP2/1 2.72 LYS34:A.N/1
DC602:E.N4/1 3.36 SER32:A.OG/1
DA603:E.OP1/1 2.84 LYS116:A.NZ/1
DA603:E.N7/1 2.43 TYR33:A.OH/1
DA603:E.N6/1 3.1 TYR33:A.OH/1
DA604:E.OP2/1 3.12 ILE81:A.N/1
DA604:E.N7/1 2.85 GLN38:A.NE2/1
DA604:E.N6/1 2.97 GLN38:A.OE1/1
DG608:E.N7/1 3.04 ARG68:A.NH1/1
DG608:E.O6/1 2.92 ARG68:A.NH2/1
DT609:E.O4/1 3.15 ARG70:A.NH1/1
DA613:E.OP1/1 3.04 LYS139:A.NZ/1
5CM614:E.OP1/1 2.92 LYS48:B.N/1
5CM614:E.OP1/1 2.76 ARG51:B.NH2/1
5CM614:E.OP2/1 2.9 ASP20:B.OD2/1
DG615:F.OP1/1 2.8 ASP20:A.OD1/1
DG615:F.N7/1 3.09 ARG70:B.NH2/1
DG615:F.O6/1 2.73 ARG70:B.NH1/1
DA616:F.OP1/1 2.81 ASP137:B.N/1
DA616:F.OP2/1 2.67 SER22:B.OG/1
DA616:F.OP2/1 3.31 LYS98:B.NZ/1
DA616:F.N7/1 2.95 GLN44:B.NE2/1
DC617:F.OP1/1 2.61 SER138:B.OG/1
DC617:F.OP2/1 3.05 ASN136:B.ND2/1
DG618:F.OP1/1 2.81 LYS142:B.N/1
DG618:F.OP1/1 2.94 THR143:B.N/1
DG618:F.OP2/1 3.19 GLN26:B.NE2/1
DG618:F.N7/1 2.99 GLN26:B.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA503:C.OP2/1 2.68 2014:B/1 2.65 GLN38:B.NE2/1
DA503:C.OP2/1 2.55 2015:B/1 3.06 LEU39:B.N/1
DA503:C.OP2/1 2.68 2014:B/1 2.9 LEU39:B.O/1
DA504:C.OP1/1 2.56 2027:B/1 3.09 LYS82:B.N/1
DA505:C.OP2/1 2.6 2022:B/1 2.74 TYR66:B.OH/1
DA505:C.OP2/1 2.87 2025:B/1 2.83 SER79:B.N/1
DA505:C.OP2/1 2.87 2025:B/1 3.02 GLU80:B.N/1
DG513:C.OP2/1 2.52 2036:A/1 3.13 SER72:A.O/1
DA514:C.OP1/1 2.93 2006:A/1 2.76 GLN47:A.OE1/1
DA514:C.OP1/1 2.93 2006:A/1 2.69 ASP18:B.O/1
DA514:C.OP1/1 2.93 2006:A/1 3.09 GLY19:B.O/1
DG515:D.N3/1 2.6 2050:A/1 3.26 LYS139:A.NZ/1
DA516:D.OP1/1 2.96 2044:A/1 2.93 LYS98:A.NZ/1
DA516:D.OP2/1 2.62 2007:A/1 2.73 ILE23:A.N/1
DA516:D.OP2/1 2.62 2007:A/1 2.86 ASN136:A.OD1/1
DA516:D.O3'/1 3.02 2052:A/1 2.95 THR140:A.N/1
DA516:D.N6/1 3.1 2021:A/1 2.74 GLN44:A.NE2/1
DA516:D.N6/1 3.1 2021:A/1 3.05 ARG68:A.NH2/1
DC517:D.OP2/1 2.21 2008:A/1 3.14 ALA25:A.O/1
DA518:D.OP1/1 2.8 2055:A/1 2.78 THR143:A.OG1/1
DA518:D.OP2/1 2.48 2012:A/1 3.02 ILE27:A.O/1
DA518:D.N6/1 2.89 2010:A/1 2.74 GLN26:A.NE2/1
DA518:D.N6/1 2.89 2010:A/1 2.94 LYS28:A.NZ/1
DG519:D.OP2/1 2.7 2055:A/1 2.78 THR143:A.OG1/1
DT520:D.O4/1 2.74 2015:A/1 2.72 GLN38:A.OE1/1
DT522:D.O4/1 2.84 2014:A/1 2.88 ASN30:A.ND2/1
DC602:E.OP2/1 2.9 2016:A/1 3.02 PHE35:A.N/1
DC602:E.N4/1 3.34 2014:A/1 2.88 ASN30:A.ND2/1
DA603:E.OP2/1 2.74 2018:A/1 3.03 GLN38:A.NE2/1
DA603:E.OP2/1 2.89 2019:A/1 2.86 LEU39:A.N/1
DA603:E.OP2/1 2.74 2018:A/1 2.82 LEU39:A.O/1
DA604:E.OP1/1 2.51 2038:A/1 3.03 LYS82:A.N/1
DA605:E.OP2/1 2.7 2032:A/1 2.84 TYR66:A.OH/1
DA605:E.OP2/1 2.9 2037:A/1 2.7 SER79:A.N/1
DA605:E.OP2/1 2.9 2037:A/1 3.19 GLU80:A.N/1
DA605:E.N6/1 2.67 2013:A/1 3.25 LYS28:A.NZ/1
DA605:E.N6/1 2.67 2013:A/1 2.98 GLN38:A.OE1/1
5CM614:E.OP2/1 2.84 2004:A/1 2.81 ASP18:A.O/1
5CM614:E.OP2/1 2.84 2004:A/1 2.99 GLY19:A.O/1
5CM614:E.OP2/1 2.84 2004:A/1 2.78 GLN47:B.OE1/1
DG615:F.OP2/1 2.61 2031:B/1 2.64 LYS98:B.NZ/1
DG615:F.OP2/1 2.77 2038:B/1 2.86 ASP137:B.OD2/1
DG615:F.N3/1 3.03 2037:B/1 3.06 LYS139:B.NZ/1
DA616:F.OP2/1 2.74 2004:B/1 2.86 ILE23:B.N/1
DA616:F.OP2/1 2.74 2004:B/1 2.64 ASN136:B.OD1/1
DA616:F.O3'/1 2.86 2039:B/1 3.12 LYS139:B.N/1
DA616:F.O3'/1 2.86 2039:B/1 3.29 THR140:B.N/1
DA616:F.N6/1 2.89 2019:B/1 2.69 GLN44:B.OE1/1
DA616:F.N6/1 2.89 2019:B/1 3.08 ARG68:B.NH2/1
DA616:F.N3/1 2.89 2040:B/1 2.66 THR140:B.OG1/1
DC617:F.OP2/1 2.85 2005:B/1 3.02 ALA25:B.N/1
DC617:F.OP2/1 2.85 2005:B/1 2.72 ALA25:B.O/1
DC617:F.O2/1 2.64 2041:B/1 2.73 THR140:B.OG1/1
DG618:F.OP2/1 2.9 2009:B/1 2.6 ILE27:B.N/1
DG618:F.OP2/1 2.66 2010:B/1 2.7 ILE27:B.O/1
DG618:F.OP2/1 2.9 2009:B/1 2.93 THR143:B.O/1
DG618:F.O6/1 2.79 2007:B/1 2.82 GLN26:B.OE1/1
DG618:F.O6/1 2.79 2007:B/1 2.56 LYS28:B.NZ/1
DT619:F.OP2/1 2.76 2042:B/1 2.35 THR143:B.OG1/1
DT620:F.O4/1 2.74 2012:B/1 3.07 ASN30:B.ND2/1
DT620:F.O4/1 2.74 2012:B/1 2.89 GLN38:B.OE1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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