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Nucleic atom dist Protein atom
DC35:U.OP1/1 3 TYR66:A.OH/1
DC35:U.OP2/1 2.91 SER115:A.OG/1
3DR36:U.OP2/1 2.71 TYR109:A.OH/1
3DR36:U.O4'/1 3.19 ASN151:A.OD1/1
DC37:U.OP2/1 3.18 SER114:A.OG/1
DC37:U.O4'/1 2.77 ARG208:A.NH1/1
DA38:U.OP1/1 2.68 TRP218:A.NE1/1
DA38:U.OP2/1 2.65 ASN161:A.OD1/1
DA38:U.OP2/1 2.76 ASN165:A.ND2/1
DT39:U.OP1/1 2.85 GLN210:A.N/1
DT39:U.OP2/1 2.45 LYS214:A.NZ/1
DG43:V.OP2/1 3.14 LYS167:A.NZ/1
DG47:V.N2/1 2.36 ASN207:A.OD1/1
DG47:V.N3/1 3.09 ASN207:A.ND2/1
DG48:V.O4'/1 2.98 ASN207:A.ND2/1
DA50:V.OP1/1 2.47 LYS18:A.NZ/1
DG51:V.OP1/1 3.42 SER14:A.N/1

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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