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Nucleic atom dist Protein atom
DC35:W.OP2/1 3.03 SER115:B.OG/1
DC35:W.O3'/1 2.76 SER112:B.OG/1
3DR36:W.O5'/1 2.99 ASN151:B.OD1/1
3DR36:W.O4'/1 3.12 ASN151:B.OD1/1
DA38:W.OP1/1 2.5 TRP218:B.NE1/1
DT39:W.OP1/1 2.8 GLN210:B.N/1
DT39:W.OP2/1 2.76 LYS214:B.NZ/1
DG47:X.N2/1 2.53 ASN207:B.OD1/1
DG47:X.N3/1 3.09 ASN207:B.ND2/1
DG48:X.O4'/1 3.04 ASN207:B.ND2/1
DA50:X.OP1/1 3.15 SER14:B.OG/1
DG51:X.OP1/1 3.38 SER14:B.N/1
DC52:X.OP2/1 3.09 ARG13:B.NH2/1

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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