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Nucleic atom dist Protein atom
DC20:B.OP1/1 2.89 ALA433:A.N/1
DA24:B.OP1/1 2.99 THR552:A.N/1
DA24:B.OP1/1 2.39 THR552:A.OG1/1
DC25:B.OP1/1 2.63 THR556:A.N/1
DC25:B.OP1/1 2.73 THR556:A.OG1/1
DT26:B.OP1/1 2.86 ARG578:A.NH1/1
DT26:B.OP2/1 2.9 ALA558:A.N/1
DT26:B.O2/1 2.48 LYS582:A.NZ/1
DC27:B.O2/1 2.92 ASN625:A.ND2/1
DT28:B.OP1/1 2.78 ILE628:A.N/1
DT28:B.OP1/1 2.88 ARG629:A.N/1
DA7:C.OP1/1 2.98 SER617:A.OG/1
DG8:C.OP1/1 2.79 GLU620:A.N/1
DA11:C.OP1/1 2.98 ASN527:A.ND2/1
DA11:C.O5'/1 3.23 ASN527:A.ND2/1
DG12:C.OP1/1 2.55 SER530:A.OG/1
DG12:C.OP1/1 3.23 GLN533:A.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC27:B.OP1/1 3 2108:A/1 2.75 ARG578:A.O/1
DC27:B.O2/1 3.04 2109:A/1 2.8 TYR587:A.OH/1
DC27:B.O2/1 3.04 2109:A/1 2.94 ASN625:A.ND2/1
DT28:B.OP1/1 2.88 2127:A/1 3.03 LEU630:A.N/1
DG6:C.OP1/1 3.03 2118:A/1 2.95 LEU610:A.O/1
DG6:C.OP1/1 2.45 2119:A/1 3.23 GLN612:A.N/1
DG6:C.N2/1 3.11 2124:A/1 2.93 ASN622:A.ND2/1
DG6:C.N3/1 3.09 2124:A/1 2.93 ASN622:A.ND2/1
DA7:C.OP1/1 2.83 2116:A/1 2.77 ASN607:A.ND2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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