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Nucleic atom dist Protein atom
DG7:W.OP1/1 3.05 GLY295:B.N/1
DG8:W.OP1/1 2.82 PHE194:B.N/1
DG8:W.OP2/1 2.56 TYR266:B.OH/1
DC9:W.OP1/1 2.94 GLU191:B.N/1
DC9:W.OP2/1 2.91 ASN259:B.ND2/1
DC9:W.OP2/1 2.71 LYS262:B.NZ/1
DC9:W.N4/1 2.8 ASP265:B.OD2/1
DC16:W.OP1/1 3.15 ARG248:A.NH2/1
DC16:W.OP2/1 3.39 ASN244:A.ND2/1
DC16:W.OP2/1 2.82 ARG248:A.NH2/1
DG17:W.OP1/1 2.97 TYR330:A.OH/1
DG17:W.OP2/1 2.93 ASN244:A.N/1
DG17:W.N7/1 3.22 ASN244:A.ND2/1
DG18:W.OP1/1 2.77 LYS237:B.NZ/1
DG18:W.N7/1 2.96 LYS260:A.NZ/1
DG18:W.O6/1 2.89 LYS260:A.NZ/1
DA19:W.N7/1 2.73 ARG264:A.NH1/1
DA19:W.N7/1 2.72 ARG264:A.NH2/1
DA19:W.N6/1 2.76 ARG264:A.NH2/1
DG24:W.N3/1 3.36 ARG190:A.NH1/1
DA25:W.O4'/1 3.16 ARG190:A.NH1/1
DC27:W.OP1/1 2.81 LYS206:A.N/1
DC6:X.OP1/1 3.07 ASN293:A.ND2/1
DA7:X.OP1/1 3.08 GLY295:A.N/1
DC8:X.OP1/1 2.82 PHE194:A.N/1
DC8:X.OP2/1 2.6 TYR266:A.OH/1
DC9:X.OP1/1 2.9 GLU191:A.N/1
DC9:X.OP2/1 2.98 ASN259:A.ND2/1
DC9:X.OP2/1 2.8 LYS262:A.NZ/1
DC9:X.N4/1 2.79 ASP265:A.OD2/1
DT16:X.OP1/1 2.95 ARG248:B.NH1/1
DT16:X.OP1/1 3.09 ARG248:B.NH2/1
DT16:X.OP2/1 3.01 ASN244:B.ND2/1
DT16:X.OP2/1 2.73 ARG248:B.NH2/1
DT16:X.O5'/1 3.44 ASN244:B.ND2/1
DG17:X.OP1/1 3.14 TYR330:B.OH/1
DG17:X.OP2/1 3.03 ASN244:B.N/1
DG17:X.N7/1 3.36 ASN244:B.ND2/1
DG18:X.OP1/1 2.79 LYS237:A.NZ/1
DG18:X.OP2/1 2.78 ARG264:B.NH1/1
DG18:X.OP2/1 2.35 ARG264:B.NH2/1
DG18:X.N7/1 2.86 LYS260:B.NZ/1
DG18:X.O6/1 2.9 LYS260:B.NZ/1
DT19:X.OP2/1 2.71 ARG264:B.NH1/1
DC24:X.O4'/1 3.03 ARG190:B.NH2/1
DC24:X.O2/1 2.8 ARG190:B.NH1/1
DG25:X.O4'/1 3.37 ARG190:B.NH1/1
DG27:X.OP1/1 3.21 LYS206:B.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG7:W.OP1/1 3.19 2033:B/1 2.74 ASN293:B.OD1/1
DG8:W.OP2/1 2.72 2025:B/1 2.9 ASP265:B.OD2/1
DG17:W.O6/1 2.84 2018:A/1 3.32 ASN244:A.ND2/1
DG17:W.O6/1 2.84 2018:A/1 2.92 LYS260:A.NZ/1
DG18:W.OP1/1 2.74 2051:A/1 2.71 VAL331:A.O/1
DG18:W.OP1/1 2.74 2051:A/1 3.22 ARG336:A.NH2/1
DA19:W.OP2/1 3.02 2052:A/1 2.78 THR333:A.N/1
DA19:W.OP2/1 3.02 2052:A/1 2.78 THR333:A.OG1/1
DA19:W.OP2/1 3.04 2053:A/1 2.95 LYS334:A.N/1
DC20:W.N4/1 2.81 2020:A/1 2.92 PRO261:A.O/1
DC20:W.N4/1 2.81 2020:A/1 2.74 ASP265:A.OD1/1
DC8:X.OP2/1 2.76 2025:A/1 2.73 ASP265:A.OD2/1
DC20:X.N4/1 3.18 2023:B/1 2.73 PRO261:B.O/1
DC20:X.N4/1 3.18 2023:B/1 3 ARG264:B.NH2/1
DC20:X.N4/1 3.18 2023:B/1 2.79 ASP265:B.OD1/1
DT26:X.OP2/1 2.94 2007:B/1 2.99 LYS206:B.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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