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Nucleic atom dist Protein atom
DG107:B.OP1/1 2.68 LYS508:A.N/1
DG107:B.OP1/1 3.13 THR509:A.N/1
DG107:B.O3'/1 3.09 ARG487:A.NE/1
DG108:B.OP1/1 3.26 ARG487:A.NH2/1
DG108:B.OP1/1 2.76 THR514:A.N/1
DG108:B.OP1/1 2.76 THR514:A.OG1/1
DG108:B.OP2/1 2.83 SER513:A.OG/1
DC109:B.OP1/1 2.95 ARG536:A.NH1/1
DC109:B.OP2/1 2.72 ALA516:A.N/1
DC109:B.O2/1 2.87 LYS540:A.NZ/1
DG110:B.N2/1 2.89 ASN583:A.OD1/1
DC111:B.OP1/1 2.73 VAL586:A.N/1
DC111:B.O2/1 3.25 ASN583:A.ND2/1
DC209:C.OP1/1 2.99 ASP578:A.N/1
DT212:C.OP1/1 2.91 ASN483:A.ND2/1
DG213:C.OP1/1 2.54 SER486:A.OG/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC111:B.OP1/1 2.69 2127:A/1 2.94 ARG587:A.N/1
DC111:B.OP1/1 2.69 2127:A/1 3.28 THR588:A.N/1
DC111:B.OP1/1 2.69 2127:A/1 3.05 THR588:A.OG1/1
DG206:C.OP1/1 2.52 2154:A/1 2.98 ARG728:A.NH2/1
DC207:C.OP1/1 2.65 2108:A/1 2.9 ALA568:A.O/1
DG208:C.OP1/1 3.09 2109:A/1 2.79 ALA568:A.O/1
DG208:C.N3/1 2.86 2121:A/1 2.6 ASN583:A.OD1/1
DC209:C.OP1/1 2.83 2116:A/1 2.51 ASP578:A.OD1/1
DC209:C.OP2/1 2.63 2117:A/1 2.7 ASP578:A.OD1/1
DG213:C.OP2/1 2.58 2075:A/1 2.92 ASN483:A.ND2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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