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Nucleic atom dist Protein atom
DG107:B.OP1/1 2.63 LYS508:A.N/1
DG107:B.OP1/1 3.14 THR509:A.N/1
DG107:B.O3'/1 3.12 ARG487:A.NE/1
DG108:B.OP1/1 3.36 ARG487:A.NE/1
DG108:B.OP1/1 3.3 ARG487:A.NH2/1
DG108:B.OP1/1 2.73 THR514:A.N/1
DG108:B.OP1/1 2.73 THR514:A.OG1/1
DG108:B.OP2/1 2.81 SER513:A.OG/1
DC109:B.OP1/1 2.91 ARG536:A.NH1/1
DC109:B.OP2/1 2.62 ALA516:A.N/1
DC109:B.O2/1 2.73 LYS540:A.NZ/1
DG110:B.N2/1 3.37 ASN583:A.ND2/1
DG110:B.N3/1 3.33 ASN583:A.ND2/1
DC111:B.OP1/1 2.74 VAL586:A.N/1
DC204:C.OP2/1 2.55 SER674:A.N/1
DT212:C.OP1/1 2.82 ASN483:A.ND2/1
DG213:C.OP1/1 2.7 SER486:A.OG/1
DG213:C.OP1/1 3.42 GLN489:A.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC204:C.OP1/1 2.28 2173:A/1 2.52 GLY672:A.O/1
DC204:C.OP1/1 2.28 2173:A/1 2.38 ARG746:A.NE/1
DC207:C.OP1/1 3.01 2136:A/1 2.72 ALA568:A.O/1
DG208:C.OP1/1 2.98 2135:A/1 2.79 ALA568:A.O/1
DC209:C.O2/1 3.03 2113:A/1 2.41 LYS540:A.NZ/1
DG211:C.OP1/1 3.08 2116:A/1 2.59 SER543:A.O/1
DG213:C.OP2/1 2.83 2095:A/1 2.81 ASN483:A.ND2/1
DG213:C.OP2/1 2.83 2095:A/1 3.17 GLN489:A.NE2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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