Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DG107:B.OP1/1 2.9 LYS508:A.N/1
DG107:B.OP1/1 2.82 THR509:A.N/1
DG107:B.OP1/1 3.01 THR509:A.OG1/1
DG107:B.O3'/1 3.22 ARG487:A.NH2/1
DG108:B.OP1/1 2.94 ARG487:A.NH2/1
DG108:B.OP1/1 2.54 THR514:A.N/1
DG108:B.OP1/1 2.75 THR514:A.OG1/1
DG108:B.OP2/1 2.8 SER513:A.OG/1
DC109:B.OP1/1 2.73 ARG536:A.NH1/1
DC109:B.OP2/1 2.61 ALA516:A.N/1
DC109:B.O2/1 3.2 LYS540:A.NZ/1
DG110:B.N3/1 3.39 ASN583:A.ND2/1
DC111:B.OP1/1 2.88 VAL586:A.N/1
DC111:B.OP1/1 2.84 ARG587:A.N/1
DC111:B.OP2/1 2.25 ARG587:A.NH2/1
DOC112:B.OP2/1 2.71 ARG660:A.NH2/1
DA201:C.O5'/1 3.08 SER515:A.OG/1
DG204:C.OP1/1 2.9 ARG677:A.NH1/1
DG204:C.OP2/1 3.25 SER674:A.N/1
DG204:C.O6/1 3.16 THR664:A.OG1/1
DG205:C.OP1/1 3.07 ARG746:A.NH1/1
DG206:C.OP1/1 3.14 ARG728:A.NH1/1
DG206:C.OP1/1 2.82 ARG728:A.NH2/1
DC207:C.OP1/1 2.86 ALA570:A.N/1
DC207:C.O3'/1 3.12 SER575:A.OG/1
DG208:C.OP1/1 2.79 SER575:A.OG/1
DC209:C.OP1/1 2.64 ASP578:A.N/1
DT212:C.OP1/1 2.93 ASN483:A.ND2/1
DT212:C.OP1/1 3.41 ASN485:A.ND2/1
DG213:C.OP1/1 2.5 SER486:A.OG/1
DG213:C.OP1/1 3.5 GLN489:A.NE2/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DG108:B.N2/1 3.03 1061:A/1 2.83 LYS540:A.NZ/1
DC111:B.O2/1 2.95 1059:A/1 2.7 GLN582:A.O/1
DC111:B.O2/1 2.95 1059:A/1 3 HIS784:A.NE2/1
DA202:C.N6/1 3.05 1060:A/1 2.51 GLU681:A.OE2/1
DG204:C.N7/1 2.37 325:C/1 2.56 ARG677:A.NH2/1
DG205:C.OP1/1 2.19 322:C/1 3.05 ALA743:A.O/1
DG205:C.N2/1 3.23 1001:A/1 2.98 GLN754:A.NE2/1
DG205:C.N3/1 3.2 1001:A/1 2.98 GLN754:A.NE2/1
DG206:C.N3/1 2.93 305:C/1 3.07 ARG573:A.NH1/1
DC207:C.O2/1 2.67 301:C/1 2.94 ASN580:A.ND2/1
DG208:C.N3/1 2.85 1105:A/1 3.04 ASN580:A.ND2/1
DG208:C.N3/1 2.85 1105:A/1 2.84 ASN583:A.ND2/1
DC209:C.OP1/1 2.76 310:C/1 3.19 ASP578:A.OD1/1
DC209:C.OP2/1 2.66 1089:A/1 2.93 LYS314:A.NZ/1
DC209:C.OP2/1 2.66 1089:A/1 2.59 ASP578:A.OD1/1
DC209:C.O4'/1 2.88 1105:A/1 3.04 ASN580:A.ND2/1
DC209:C.O4'/1 2.88 1105:A/1 2.84 ASN583:A.ND2/1
DC209:C.O2/1 2.88 1043:A/1 2.43 LYS540:A.NZ/1
DC210:C.O4'/1 3.1 1043:A/1 2.43 LYS540:A.NZ/1
DG211:C.OP1/1 2.75 326:C/1 2.77 SER543:A.O/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text