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Nucleic atom dist Protein atom
DA5:B.OP1/1 2.88 LYS431:A.NZ/1
DG8:B.OP1/1 3.11 THR552:A.N/1
DG8:B.OP1/1 2.3 THR552:A.OG1/1
DG9:B.OP1/1 2.64 THR556:A.N/1
DG9:B.OP1/1 3.05 THR556:A.OG1/1
DG9:B.O3'/1 2.86 ARG578:A.NH1/1
DA10:B.OP1/1 2.51 ARG578:A.NH1/1
DA10:B.OP2/1 2.98 ALA558:A.N/1
DA10:B.N3/1 2.79 LYS582:A.NZ/1
DC11:B.O2/1 2.97 ASN625:A.ND2/1
DT12:B.OP1/1 2.93 ILE628:A.N/1
DT12:B.OP1/1 2.99 ARG629:A.N/1
DC13:B.O3'/1 2.85 ASP830:A.OD1/1
DC13:B.O2/1 2.59 ARG615:A.NH1/1
DG5:C.OP1/1 2.77 ARG789:A.NE/1
DG5:C.N2/1 2.93 GLN797:A.NE2/1
DG5:C.N3/1 2.94 GLN797:A.NE2/1
DA6:C.O4'/1 2.64 GLN797:A.NE2/1
DG7:C.OP1/1 2.91 GLN612:A.N/1
DC9:C.OP1/1 2.76 GLU620:A.N/1
DG12:C.OP1/1 2.86 ASN527:A.ND2/1
DT13:C.OP1/1 2.93 SER530:A.OG/1
DA14:C.OP1/1 2.44 LYS532:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC11:B.OP1/1 2.45 101:B/1 2.76 ARG578:A.O/1
DC11:B.OP1/1 2.35 102:B/1 3.13 GLN579:A.O/1
DG5:C.O3'/1 2.66 105:C/1 2.81 ASN793:A.OD1/1
DG5:C.O3'/1 2.66 105:C/1 3.04 THR794:A.OG1/1
DA6:C.N3/1 2.68 102:C/1 2.94 ARG615:A.NH1/1
DC10:C.OP1/1 2.51 101:C/1 3 LYS593:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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