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Nucleic atom dist Protein atom
3DR4:T.OP2/1 2.26 SER360:A.OG/1
3DR4:T.OP2/1 3.46 ILE362:A.N/1
3DR4:T.O3'/1 3.08 ASN572:A.ND2/1
DT5:T.OP1/1 2.93 ASN572:A.ND2/1
DT6:T.O3'/1 2.81 GLY393:A.N/1
DA7:T.OP1/1 2.9 GLY393:A.N/1
DA8:T.OP1/1 2.65 LYS705:A.NZ/1
DT13:T.OP1/1 2.77 LYS844:A.NZ/1
DC14:T.OP1/1 2.73 LYS800:A.N/1
DG110:P.OP1/1 2.96 LYS790:A.NZ/1
DG110:P.OP1/1 2.88 TYR791:A.OH/1
DC111:P.OP1/1 2.99 HIS804:A.NE2/1
DC111:P.OP2/1 3.22 ASN786:A.ND2/1
DT112:P.OP1/1 3.15 SER784:A.N/1
DT112:P.OP2/1 2.63 SER784:A.OG/1
DT113:P.OP1/1 2.86 SER735:A.N/1
DT113:P.OP1/1 2.8 SER735:A.OG/1
DT113:P.OP2/1 2.81 ASN284:A.ND2/1
DA114:P.OP1/1 2.77 GLY729:A.N/1
DA114:P.N3/1 2.86 LYS706:A.NZ/1
DA115:P.OP1/1 2.7 TYR708:A.OH/1
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Nucleic atom d_n2w water d_p2w Protein atom
3DR4:T.OP1/1 2.67 1111:T/1 2.91 PHE359:A.O/1
DT6:T.OP1/1 2.61 1114:T/1 3.07 TYR391:A.N/1
DT6:T.O2/1 2.7 1125:T/1 3.08 ALA394:A.N/1
DA7:T.O4'/1 2.85 1108:A/1 2.79 LYS706:A.NZ/1
DA8:T.OP1/1 2.78 1105:T/1 2.82 VAL396:A.N/1
DA8:T.OP1/1 2.78 1105:T/1 3.24 VAL396:A.O/1
DG9:T.OP1/1 2.67 1513:A/1 2.59 GLU398:A.OE1/1
DG9:T.OP1/1 2.64 1104:T/1 2.83 GLU398:A.OE2/1
DG9:T.OP1/1 2.64 1104:T/1 2.92 LYS705:A.N/1
DC10:T.OP1/1 2.79 1109:T/1 2.83 THR703:A.OG1/1
DC10:T.O2/1 2.93 1119:T/1 2.96 LYS734:A.NZ/1
DA11:T.OP1/1 2.73 1283:A/1 2.56 LYS874:A.O/1
DT13:T.OP1/1 2.67 1120:T/1 2.88 CYS801:A.O/1
DT13:T.OP1/1 2.67 1120:T/1 2.75 ARG806:A.NE/1
DT112:P.OP1/1 2.77 1569:A/1 2.71 SER735:A.OG/1
DT112:P.OP1/1 2.77 1569:A/1 2.85 LYS829:A.NZ/1
DT112:P.OP2/1 2.88 1434:A/1 2.84 ASN284:A.ND2/1
DT112:P.OP2/1 2.88 1434:A/1 3.19 LYS829:A.NZ/1
DT113:P.OP1/1 2.75 202:P/1 3 GLN733:A.O/1
DA114:P.OP1/1 2.59 203:P/1 2.99 GLN733:A.NE2/1
DA114:P.O3'/1 2.97 1101:A/1 2.66 TYR619:A.OH/1
DA114:P.O3'/1 2.97 1101:A/1 2.77 ASP621:A.OD2/1
DA115:P.OP1/1 2.85 1101:A/1 2.66 TYR619:A.OH/1
DA115:P.OP1/1 2.85 1101:A/1 2.77 ASP621:A.OD2/1
DA115:P.OP1/1 2.59 201:P/1 2.79 SER624:A.OG/1
DA115:P.OP1/1 2.59 201:P/1 2.67 TYR626:A.OH/1
DA115:P.N3/1 2.93 1396:A/1 2.8 THR622:A.OG1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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