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Nucleic atom dist Protein atom
DT1:T.O3'/1 3.42 ASN255:A.ND2/1
DT1:T.N3/1 2.72 ASN786:A.OD1/1
DT1:T.O4/1 2.87 ASN786:A.ND2/1
DC2:T.OP1/1 2.96 ARG260:A.NH2/1
DC2:T.OP2/1 3.29 ASN255:A.ND2/1
DC2:T.OP2/1 3.2 ARG260:A.NE/1
DC2:T.N4/1 2.88 GLU219:A.OE2/1
3DR4:T.OP2/1 2.23 SER360:A.OG/1
3DR4:T.O3'/1 2.99 ASN572:A.ND2/1
DG5:T.OP1/1 3.05 ASN572:A.ND2/1
DA7:T.OP1/1 2.98 GLY393:A.N/1
DA8:T.OP1/1 2.7 LYS705:A.NZ/1
DA11:T.OP2/1 3.03 LYS878:A.NZ/1
DG12:T.OP1/1 2.71 LYS874:A.NZ/1
DT13:T.OP1/1 2.75 LYS844:A.NZ/1
DC14:T.OP1/1 2.72 LYS800:A.N/1
DG110:P.OP1/1 2.71 TYR791:A.OH/1
DC111:P.OP1/1 3.11 ASN786:A.N/1
DC111:P.OP1/1 2.8 HIS804:A.NE2/1
DC111:P.OP2/1 2.84 ASN786:A.ND2/1
DT112:P.OP1/1 2.9 SER784:A.N/1
DT112:P.OP2/1 2.81 SER784:A.OG/1
DT113:P.OP1/1 2.74 SER735:A.N/1
DT113:P.OP1/1 2.97 SER735:A.OG/1
DT113:P.OP2/1 2.67 ASN284:A.ND2/1
DA114:P.OP1/1 2.88 GLY729:A.N/1
DA114:P.N3/1 2.97 LYS706:A.NZ/1
DOC115:P.OP1/1 2.42 TYR708:A.OH/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG3:T.O6/1 2.95 116:T/1 2.95 ARG260:A.NH2/1
DG3:T.N2/1 2.82 132:T/1 3.09 GLU219:A.OE1/1
DG5:T.N2/1 3.28 1113:A/1 2.57 TYR416:A.OH/1
DT6:T.OP1/1 2.66 125:T/1 2.82 GLN389:A.O/1
DT6:T.OP1/1 2.62 106:T/1 3.23 TYR391:A.N/1
DT6:T.O2/1 2.78 101:T/1 3 ALA394:A.N/1
DA7:T.O4'/1 2.84 104:T/1 2.84 LYS706:A.NZ/1
DA8:T.OP1/1 2.7 102:T/1 2.94 VAL396:A.N/1
DG9:T.OP1/1 2.65 103:T/1 2.77 GLU398:A.OE2/1
DG9:T.OP1/1 2.65 103:T/1 2.86 LYS705:A.N/1
DC10:T.OP1/1 2.79 1272:A/1 2.64 THR703:A.OG1/1
DA11:T.OP1/1 2.61 1249:A/1 2.53 LYS874:A.O/1
DG12:T.OP2/1 2.76 120:T/1 3.21 LYS878:A.NZ/1
DT13:T.OP1/1 2.75 1305:A/1 2.8 CYS801:A.O/1
DT13:T.OP1/1 2.75 1305:A/1 2.69 ARG806:A.NE/1
DT112:P.OP1/1 2.75 1345:A/1 2.64 SER735:A.OG/1
DT112:P.OP1/1 2.75 1345:A/1 3.1 LYS829:A.NZ/1
DA114:P.OP1/1 2.45 207:P/1 3.01 GLN733:A.NE2/1
DA114:P.O3'/1 3.15 1124:A/1 2.5 TYR619:A.OH/1
DA114:P.O3'/1 3.15 1124:A/1 2.58 ASP621:A.OD2/1
DOC115:P.OP1/1 2.83 1124:A/1 2.5 TYR619:A.OH/1
DOC115:P.OP1/1 2.83 1124:A/1 2.58 ASP621:A.OD2/1
DOC115:P.OP1/1 2.79 1216:A/1 2.75 SER624:A.OG/1
DOC115:P.OP1/1 2.79 1216:A/1 3.03 TYR626:A.OH/1
DOC115:P.OP2/1 2.56 203:P/1 3.01 LYS726:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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