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Nucleic atom dist Protein atom
DT6:C.OP2/1 3.16 SER497:A.OG/1
DC9:C.OP1/1 2.96 TRP931:A.NE1/1
DA11:C.OP1/1 3.07 LYS723:A.NZ/1
DT12:C.OP2/1 2.98 TYR757:A.OH/1
DG13:C.OP2/1 3.13 ARG804:B.NH2/1
DG13:C.O3'/1 2.22 GLU461:A.OE1/1
DG13:C.N2/1 3.44 LYS489:A.N/1
DG13:C.N3/1 3.24 LYS489:A.N/1
DC3:D.OP1/1 3.1 LYS440:B.NZ/1
DA6:D.OP1/1 3.32 GLN500:A.NE2/1
DT7:D.OP1/1 2.83 ASN492:A.N/1
DT7:D.O3'/1 3.13 HIS548:A.NE2/1
DC8:D.OP1/1 3.22 HIS548:A.NE2/1
DC8:D.OP2/1 2.58 ASN492:A.ND2/1
DC8:D.O3'/1 3.17 GLY857:A.O/1
DG9:D.OP1/1 2.81 ARG661:A.NE/1
DG9:D.OP1/1 2.79 ARG661:A.NH2/1
DG9:D.OP1/1 2.87 GLY859:A.N/1
DG9:D.N3/1 3.19 SER861:A.OG/1
DT10:D.OP1/1 2.41 LYS662:A.NZ/1
DC11:D.OP1/1 3.14 THR996:A.O/1
DC11:D.OP1/1 2.92 ASN998:A.N/1
DC11:D.OP1/1 3.17 SER999:A.N/1
DA12:D.OP1/1 2.66 THR996:A.OG1/1
DC14:D.OP1/1 2.3 LYS990:A.NZ/1
DT6:E.OP2/1 3.16 SER497:B.OG/1
DC9:E.OP1/1 2.96 TRP931:B.NE1/1
DA11:E.OP1/1 3.07 LYS723:B.NZ/1
DT12:E.OP2/1 2.98 TYR757:B.OH/1
DG13:E.OP2/1 3.13 ARG804:A.NH2/1
DG13:E.O3'/1 2.22 GLU461:B.OE1/1
DG13:E.N2/1 3.44 LYS489:B.N/1
DG13:E.N3/1 3.24 LYS489:B.N/1
DC3:F.OP1/1 3.1 LYS440:A.NZ/1
DA6:F.OP1/1 3.32 GLN500:B.NE2/1
DT7:F.OP1/1 2.83 ASN492:B.N/1
DT7:F.O3'/1 3.13 HIS548:B.NE2/1
DC8:F.OP1/1 3.22 HIS548:B.NE2/1
DC8:F.OP2/1 2.58 ASN492:B.ND2/1
DC8:F.O3'/1 3.17 GLY857:B.O/1
DG9:F.OP1/1 2.81 ARG661:B.NE/1
DG9:F.OP1/1 2.79 ARG661:B.NH2/1
DG9:F.OP1/1 2.87 GLY859:B.N/1
DG9:F.N3/1 3.19 SER861:B.OG/1
DT10:F.OP1/1 2.41 LYS662:B.NZ/1
DC11:F.OP1/1 3.14 THR996:B.O/1
DC11:F.OP1/1 2.92 ASN998:B.N/1
DC11:F.OP1/1 3.17 SER999:B.N/1
DA12:F.OP1/1 2.66 THR996:B.OG1/1
DC14:F.OP1/1 2.3 LYS990:B.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA11:C.O4'/1 3.08 1309:A/1 2.5 SER714:A.OG/1
DG13:C.OP1/1 2.96 202:C/1 2.25 TYR805:B.OH/1
DC3:D.OP2/1 2.78 103:D/1 2.54 ASP463:B.OD2/1
DA11:E.O4'/1 3.08 1309:B/1 2.5 SER714:B.OG/1
DG13:E.OP1/1 2.96 202:E/1 2.25 TYR805:A.OH/1
DC3:F.OP2/1 2.78 103:F/1 2.54 ASP463:A.OD2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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