Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DC3:B.O2/1 3 ARG104:D.NH1/1
DC3:B.O2/1 2.87 ARG104:D.NH2/1
DA4:B.O4'/1 3.07 ARG104:D.NH2/1
DG15:B.OP1/1 2.73 LYS111:C.NZ/1
DA16:B.OP1/1 2.93 ASN114:C.N/1
DA16:B.O4'/1 2.94 ASN81:C.ND2/1
DG17:B.O3'/1 2.46 GLU8:C.OE1/1
DG17:B.O3'/1 3.19 THR9:C.N/1
DG17:B.N2/1 2.76 GLN46:C.OE1/1
DA4:A.OP1/1 3.09 LYS101:C.NZ/1
DA14:A.N3/1 2.67 TYR112:D.OH/1
DC16:A.OP1/1 2.81 ASN114:D.N/1
DC16:A.O4'/1 2.89 ASN81:D.ND2/1
DT17:A.O3'/1 2.45 GLU8:D.OE1/1
DT17:A.O3'/1 3.12 THR9:D.N/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DG17:B.OP1/1 2.97 378:C/1 2.75 GLU8:C.OE1/1
DG17:B.OP1/1 2.97 378:C/1 2.57 HIS134:C.ND1/1
DA4:A.N3/1 3.25 370:C/1 2.91 ARG104:C.NH2/1
DA14:A.O3'/1 3.04 340:D/1 2.87 TYR112:D.N/1
DC15:A.OP1/1 2.88 340:D/1 2.87 TYR112:D.N/1
DT17:A.OP2/1 3.02 363:D/1 2.24 HIS134:D.ND1/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text