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Nucleic atom dist Protein atom
DT4:B.OP1/1 3.06 LYS156:A.N/1
DT4:B.OP2/1 3 THR155:A.OG1/1
DG11:B.OP1/1 3.13 LYS113:A.NZ/1
DG11:B.N3/1 2.7 ARG112:A.NH1/1
DG12:B.O4'/1 3.15 ARG112:A.NH1/1
DG12:B.O4'/1 3.08 ARG112:A.NH2/1
DA9:C.OP1/1 2.79 ASN174:A.N/1
DA9:C.OP2/1 2.94 ARG264:A.NE/1
DA9:C.N3/1 2.86 ARG76:A.NE/1
DG10:C.OP1/1 2.86 HIS74:A.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT9:B.O3'/1 2.74 103:B/1 3.18 TRP30:A.NE1/1
DT9:B.O3'/1 2.74 103:B/1 3.1 ASN32:A.ND2/1
DC10:B.OP1/1 2.54 103:B/1 3.18 TRP30:A.NE1/1
DC10:B.OP1/1 2.54 103:B/1 3.1 ASN32:A.ND2/1
DA9:C.OP1/1 2.51 112:C/1 3.12 GLN3:A.OE1/1
DA9:C.OP1/1 3.26 456:A/1 3.04 GLN3:A.NE2/1
DA9:C.OP1/1 2.51 112:C/1 3.07 GLN3:A.NE2/1
DA9:C.OP1/1 2.51 112:C/1 2.63 LYS60:A.NZ/1
DA9:C.OP2/1 2.9 473:A/1 3.29 ARG264:A.NE/1
DA9:C.OP2/1 2.9 473:A/1 2.67 ARG264:A.NH1/1
DG10:C.OP1/1 2.53 102:C/1 2.92 LYS60:A.N/1
DG10:C.OP2/1 2.5 101:C/1 2.86 LYS60:A.NZ/1
DG10:C.OP2/1 2.67 103:C/1 2.77 GLY171:A.N/1
DC12:C.OP1/1 2.84 599:A/1 2.96 HIS118:A.NE2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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