Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DA4:R.OP2/1 3 LYS234:P.N/1
DA4:R.OP2/1 3.04 THR237:P.OG1/1
DA5:R.OP1/1 2.94 LYS234:P.NZ/1
DA5:R.OP2/1 2.43 SER236:P.OG/1
DT6:R.N3/1 2.67 ASN191:P.OD1/1
DG8:R.N2/1 2.99 ASP79:P.OD1/1
DG9:R.O6/1 2.82 ARG243:M.NH2/1
DA10:R.OP1/1 2.9 ARG353:M.NH1/1
DG11:R.N2/1 3.15 ASN187:M.OD1/1
DG11:R.N2/1 2.62 TYR256:M.OH/1
DG14:R.OP1/1 2.35 ARG422:M.NH2/1
DG14:R.O6/1 3.2 ARG331:M.NH2/1
DG14:R.N2/1 2.34 ASP326:M.OD1/1
DT15:R.OP1/1 3.24 ARG422:M.NH2/1
DT15:R.OP2/1 3.18 ARG422:M.NE/1
DG12:Q.OP1/1 2.79 ASN1442:N.N/1
DA13:Q.OP1/1 2.72 ARG615:N.NH1/1
DC16:Q.OP1/1 2.46 ARG1031:M.NE/1
DG17:Q.OP1/1 2.73 ARG622:N.NH1/1
DG17:Q.OP2/1 2.88 ARG622:N.NH2/1
DA18:Q.OP1/1 2.97 LYS1024:M.N/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text