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Nucleic atom dist Protein atom
DA5:A.OP1/1 3.43 ARG96:C.NH2/1
DA5:A.OP2/1 3.15 ARG96:C.NH1/1
DC6:A.OP2/1 2.78 LYS97:C.NZ/1
DC6:A.N4/1 2.82 HIS90:C.O/1
DG7:A.OP1/1 2.8 ARG62:C.N/1
DG7:A.OP1/1 3.15 ARG62:C.NE/1
DG7:A.OP1/1 2.97 ARG105:C.NH2/1
DG7:A.OP2/1 3.29 ARG62:C.NE/1
DG7:A.OP2/1 2.7 ARG62:C.NH1/1
DA4:B.OP2/1 2.85 LYS94:C.NZ/1
DA5:B.OP1/1 2.89 TYR81:C.OH/1
DA5:B.N6/1 3.09 GLN91:C.NE2/1
DC6:B.N4/1 2.87 SER89:C.O/1
DG7:B.N7/1 3.32 HIS90:C.ND1/1
DG7:B.O6/1 2.73 HIS90:C.ND1/1
DG10:B.O3'/1 3.17 LYS63:C.NZ/1
DG11:B.OP1/1 2.43 LYS63:C.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC6:A.OP1/1 2.7 201:A/1 2.99 CYS98:C.N/1
DC6:A.OP2/1 2.61 202:A/1 2.79 GLN91:C.OE1/1
DC6:A.OP2/1 2.61 202:A/1 3.03 ILE92:C.N/1
DG7:A.OP2/1 3 307:C/1 2.89 LYS97:C.NZ/1
DG7:A.OP2/1 3 307:C/1 2.9 LEU101:C.O/1
DG7:A.N7/1 2.85 203:A/1 2.98 GLN91:C.OE1/1
DG7:A.N7/1 2.85 203:A/1 3.08 LYS97:C.NZ/1
DG10:B.N3/1 2.99 101:B/1 2.99 LYS61:C.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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