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Nucleic atom dist Protein atom
DG2:C.O4'/1 3.03 ASN77:A.ND2/1
DG2:C.O3'/1 3.34 ASN106:A.ND2/1
DC3:C.OP1/1 2.71 THR104:A.OG1/1
DC3:C.OP1/1 2.8 SER147:A.OG/1
DC3:C.OP2/1 2.75 THR148:A.N/1
DC3:C.OP2/1 2.76 THR148:A.OG1/1
DC3:C.O5'/1 3.16 ASN106:A.ND2/1
DG4:C.OP1/1 2.78 TRP139:A.NE1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG2:C.OP1/1 2.66 212:C/1 3.25 THR148:A.OG1/1
DG2:C.N3/1 2.84 208:C/1 2.95 ASN106:A.ND2/1
DG4:C.OP1/1 2.6 201:C/1 2.79 LYS138:A.NZ/1
DG4:C.OP2/1 2.68 202:C/1 2.75 LYS146:A.O/1
DG4:C.OP2/1 2.82 211:C/1 2.91 LYS146:A.NZ/1

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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