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Nucleic atom dist Protein atom
DG2:E.O4'/1 2.99 ASN77:B.ND2/1
DC3:E.OP1/1 2.64 THR104:B.OG1/1
DC3:E.OP1/1 2.8 SER147:B.OG/1
DC3:E.OP2/1 2.86 THR148:B.N/1
DC3:E.O5'/1 3.16 ASN106:B.ND2/1
DG4:E.OP1/1 2.75 TRP139:B.NE1/1
DG24:F.O3'/1 3.29 ASN132:B.O/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG2:E.O3'/1 3.05 318:B/1 2.89 ASN106:B.N/1
DG2:E.N3/1 2.84 201:F/1 3.21 ASN106:B.ND2/1
DC3:E.OP2/1 2.62 408:B/1 2.08 THR148:B.OG1/1
DG4:E.OP1/1 2.46 202:E/1 2.91 LYS138:B.NZ/1
DG4:E.OP2/1 2.63 201:E/1 2.73 LYS146:B.O/1
DG4:E.OP2/1 2.69 206:E/1 3.25 LYS146:B.NZ/1
DG24:F.OP2/1 2.99 422:B/1 2.82 LYS180:B.NZ/1
DG24:F.O3'/1 2.6 447:B/1 2.29 ASN105:B.OD1/1
DG24:F.O3'/1 2.6 447:B/1 2.67 GLU109:B.OE2/1
DG24:F.O3'/1 2.91 323:B/1 2.7 SER133:B.OG/1
DG24:F.N2/1 2.8 201:F/1 3.21 ASN106:B.ND2/1
DG24:F.N3/1 2.85 202:F/1 3.07 ASN105:B.OD1/1
DG24:F.N3/1 2.85 202:F/1 3.28 ASN106:B.OD1/1

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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