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Nucleic atom dist Protein atom
DG2:E.O4'/1 3.03 ASN77:B.ND2/1
DC3:E.OP1/1 2.68 THR104:B.OG1/1
DC3:E.OP1/1 2.75 SER147:B.OG/1
DC3:E.OP2/1 2.69 THR148:B.N/1
DC3:E.OP2/1 2.7 THR148:B.OG1/1
DC3:E.O5'/1 3.22 ASN106:B.ND2/1
DG4:E.OP1/1 2.82 TRP139:B.NE1/1
DG24:F.O3'/1 3.43 ASN132:B.ND2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG2:E.O3'/1 3.13 322:B/1 2.87 ASN106:B.N/1
DG2:E.N3/1 2.8 202:E/1 3.16 ASN106:B.ND2/1
DG4:E.OP1/1 2.49 203:E/1 2.95 LYS138:B.NZ/1
DG4:E.OP2/1 2.68 201:E/1 2.76 LYS146:B.O/1
DG4:E.OP2/1 2.49 204:E/1 3.28 LYS146:B.NZ/1
DG24:F.O5'/1 2.5 215:F/1 2.66 LYS180:B.NZ/1

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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