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Nucleic atom dist Protein atom
DA2:C.OP1/1 2.93 GLY259:A.N/1
DA2:C.OP1/1 2.94 THR262:A.N/1
DA2:C.OP1/1 2.73 THR262:A.OG1/1
DA2:C.OP2/1 3.26 LYS261:A.N/1
DA3:C.OP1/1 2.81 GLY257:A.N/1
DA3:C.OP1/1 3.21 VAL258:A.N/1
DA3:C.O3'/1 3.4 ARG432:A.NH2/1
DA4:C.OP1/1 2.83 HIS342:A.NE2/1
DA4:C.OP1/1 2.91 ARG432:A.NH2/1
DA5:C.OP1/1 3.08 ASP343:A.OD2/1
DA5:C.OP1/1 3.03 ASP345:A.OD2/1
DA5:C.O3'/1 2.95 TRP450:A.O/1
DA5:C.N7/1 2.8 ASN474:A.OD1/1
DA5:C.N6/1 2.48 ASP399:A.N/1
DA5:C.N6/1 3.45 ARG454:A.NE/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA3:C.OP2/1 2.71 101:C/1 3.07 VAL258:A.O/1
DA4:C.OP1/1 2.79 102:C/1 3.15 HIS342:A.NE2/1
DA4:C.OP1/1 2.79 102:C/1 2.79 ARG432:A.NE/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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