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Nucleic atom dist Protein atom
DT1:T.N3/1 2.94 ASN786:A.OD1/1
DT1:T.O4/1 3.22 ASN786:A.ND2/1
DC2:T.OP1/1 3.19 ARG260:A.NH2/1
DC2:T.OP2/1 3.36 ARG260:A.NE/1
DC2:T.N4/1 2.86 GLU219:A.OE2/1
DT4:T.OP1/1 2.44 SER360:A.OG/1
DT4:T.OP1/1 3.11 ILE362:A.N/1
DT4:T.O3'/1 3.14 ASN572:A.ND2/1
DA5:T.OP1/1 3.25 ASN572:A.ND2/1
DA7:T.OP1/1 2.91 GLY393:A.N/1
DA8:T.OP1/1 2.77 LYS705:A.NZ/1
DG12:T.OP1/1 2.74 LYS874:A.NZ/1
DT13:T.OP1/1 2.73 LYS844:A.NZ/1
DC14:T.OP1/1 2.86 LYS800:A.N/1
DG110:P.OP1/1 2.7 TYR791:A.OH/1
DC111:P.OP1/1 3.15 SER784:A.O/1
DC111:P.OP1/1 3.15 ASN786:A.N/1
DC111:P.OP1/1 2.81 HIS804:A.NE2/1
DC111:P.OP2/1 2.87 ASN786:A.ND2/1
DT112:P.OP1/1 3.11 SER784:A.N/1
DT112:P.OP2/1 2.65 SER784:A.OG/1
DT113:P.OP1/1 2.8 SER735:A.N/1
DT113:P.OP1/1 2.89 SER735:A.OG/1
DT113:P.OP2/1 2.8 ASN284:A.ND2/1
DA114:P.OP1/1 2.83 GLY729:A.N/1
DA114:P.N3/1 2.95 LYS706:A.NZ/1
DT115:P.OP1/1 2.7 TYR708:A.OH/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG3:T.O6/1 2.7 146:T/1 3.15 ARG260:A.NH2/1
DA5:T.N3/1 2.76 1135:A/1 2.62 TYR567:A.OH/1
DT6:T.OP1/1 2.77 111:T/1 2.79 GLN389:A.O/1
DT6:T.OP1/1 2.56 104:T/1 3.22 TYR391:A.N/1
DT6:T.O4'/1 2.82 1135:A/1 2.62 TYR567:A.OH/1
DT6:T.O2/1 2.79 102:T/1 3.03 ALA394:A.N/1
DA7:T.O4'/1 2.86 1113:A/1 2.86 LYS706:A.NZ/1
DA8:T.OP1/1 2.7 101:T/1 2.94 VAL396:A.N/1
DG9:T.OP1/1 2.71 1308:A/1 2.69 GLU398:A.OE1/1
DG9:T.OP1/1 2.75 1137:A/1 2.67 GLU398:A.OE2/1
DG9:T.OP1/1 2.75 1137:A/1 2.86 LYS705:A.N/1
DG9:T.N3/1 2.73 106:T/1 3.1 LYS734:A.NZ/1
DC10:T.OP1/1 2.94 1158:A/1 2.65 THR703:A.OG1/1
DC10:T.O4'/1 2.89 106:T/1 3.1 LYS734:A.NZ/1
DA11:T.OP1/1 2.64 115:T/1 2.65 LYS874:A.O/1
DT13:T.OP1/1 2.79 103:T/1 2.89 CYS801:A.O/1
DT13:T.OP1/1 2.79 103:T/1 2.84 ARG806:A.NE/1
DT112:P.OP1/1 2.79 1375:A/1 2.56 SER735:A.OG/1
DT112:P.OP1/1 2.79 1375:A/1 2.73 LYS829:A.NZ/1
DT112:P.OP2/1 2.93 1383:A/1 2.75 ASN284:A.ND2/1
DA114:P.OP1/1 2.49 202:P/1 3.1 GLN733:A.NE2/1
DA114:P.O3'/1 3.05 1679:A/1 2.5 TYR619:A.OH/1
DA114:P.O3'/1 3.05 1679:A/1 2.8 ASP621:A.OD2/1
DT115:P.OP1/1 2.95 1679:A/1 2.5 TYR619:A.OH/1
DT115:P.OP1/1 2.95 1679:A/1 2.8 ASP621:A.OD2/1
DT115:P.OP1/1 2.62 1152:A/1 2.61 SER624:A.OG/1
DT115:P.OP1/1 2.62 1152:A/1 3.22 TYR626:A.OH/1
DT115:P.OP2/1 2.78 212:P/1 2.88 LYS726:A.NZ/1
DT115:P.O2/1 2.74 203:P/1 2.82 THR622:A.OG1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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