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Nucleic atom dist Protein atom
DA6:T.OP2/1 3.18 LYS280:A.NZ/1
DA6:T.N3/1 3.16 ARG283:A.NH1/1
DG7:T.OP1/1 2.8 THR292:A.OG1/1
DC8:T.OP1/1 2.84 ASN294:A.ND2/1
DG9:T.OP1/1 2.54 TYR296:A.OH/1
DG9:T.N3/1 2.95 LYS234:A.NZ/1
DC10:T.OP1/1 3.1 THR233:A.N/1
DC10:T.OP1/1 2.82 LYS234:A.N/1
DA11:T.OP1/1 2.94 LYS230:A.N/1
DC8:P.OP1/1 3.02 GLY107:A.N/1
DC8:P.OP1/1 2.8 ALA110:A.N/1
DC8:P.OP2/1 2.98 SER109:A.N/1
DG9:P.OP1/1 2.71 GLY105:A.N/1
DC10:P.OP1/1 2.7 ARG254:A.NH1/1
DC10:P.O3'/1 3.05 ASP192:A.OD1/1
DG1:D.OP1/1 2.67 LYS68:A.NZ/1
DT2:D.OP1/1 2.95 GLY66:A.N/1
DT2:D.OP1/1 2.97 ILE69:A.N/1
DT2:D.OP2/1 3.19 LYS68:A.N/1
DC3:D.OP1/1 2.85 GLY64:A.N/1
DC3:D.OP1/1 2.78 VAL65:A.O/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA6:T.N6/1 2.89 110:T/1 3.25 ASN37:A.OD1/1
DG7:T.N3/1 2.82 506:A/1 2.87 ARG283:A.NH1/1
DG7:T.N3/1 2.82 506:A/1 3.23 ARG283:A.NH2/1
DG7:T.N3/1 2.82 506:A/1 2.56 GLU295:A.OE1/1
DG9:T.N2/1 2.97 504:A/1 2.63 LYS234:A.NZ/1
DC10:T.OP2/1 2.85 104:T/1 3.06 GLU232:A.N/1
DA11:T.OP2/1 2.83 109:T/1 2.83 LYS230:A.O/1
DA11:T.O3'/1 3.15 664:A/1 3.02 HIS135:A.N/1
DT12:T.OP1/1 2.61 105:T/1 2.86 HIS134:A.N/1
DG9:P.OP2/1 2.67 104:P/1 2.99 THR101:A.O/1
DG9:P.N3/1 2.84 650:A/1 2.65 LYS234:A.NZ/1
DC10:P.O4'/1 3 650:A/1 2.65 LYS234:A.NZ/1
DG1:D.OP2/1 2.38 102:D/1 3.29 LYS35:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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