Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DA-54:I.OP1/1 3.17 SER53:D.N/1
DA-44:I.OP1/1 2.16 ARG32:C.NH1/1
DA-43:I.OP1/1 2.79 ARG17:C.N/1
DA-43:I.OP2/1 2.93 ARG17:C.NE/1
DG-42:I.OP1/1 2.62 LYS15:C.N/1
DG-42:I.OP2/1 2.78 ARG20:C.NH2/1
DG-34:I.OP1/1 3.01 SER84:D.N/1
DG-34:I.OP1/1 3.25 SER84:D.OG/1
DG-34:I.OP1/1 2.58 THR85:D.OG1/1
DG-33:I.OP1/1 3.31 ARG83:D.NE/1
DG-33:I.OP2/1 3.1 ARG83:D.NH2/1
DC-24:I.OP2/1 3.29 SER86:A.N/1
DC-23:I.OP1/1 2.86 ARG72:A.NH1/1
DC-23:I.OP1/1 2.99 PHE84:A.N/1
DC-23:I.OP2/1 2.96 ARG72:A.NH2/1
DC-13:I.OP1/1 3.18 ARG36:B.NH2/1
DC-13:I.OP2/1 3.08 ARG36:B.NH1/1
DG-5:I.OP1/1 2.68 ARG42:A.NE/1
DT-3:I.OP1/1 2.78 VAL117:A.N/1
DT-3:I.OP1/1 2.46 THR118:A.OG1/1
DG7:I.OP2/1 2.88 GLY48:F.N/1
DA8:I.OP1/1 2.65 ILE46:F.N/1
DA8:I.O3'/1 3.33 GLY44:E.N/1
DA9:I.OP1/1 2.69 GLY44:E.N/1
DA9:I.OP1/1 2.9 VAL46:E.N/1
DA9:I.OP1/1 3.09 ALA47:E.N/1
DA9:I.N3/1 2.83 ARG40:E.NH2/1
DC10:I.OP1/1 2.87 TYR41:E.N/1
DT17:I.OP1/1 3.27 ARG69:E.NH1/1
DT17:I.OP1/1 3.02 ARG69:E.NH2/1
DT17:I.OP2/1 2.61 ARG69:E.NH2/1
DT18:I.OP1/1 2.7 LYS64:E.N/1
DT18:I.OP2/1 2.94 LEU65:E.N/1
DA28:I.OP1/1 2.59 LYS79:F.N/1
DA28:I.OP1/1 2.99 THR80:F.N/1
DA28:I.OP1/1 2.91 THR80:F.OG1/1
DA28:I.O5'/1 2.88 THR80:F.OG1/1
DT38:I.OP1/1 2.85 ALA45:G.N/1
DA39:I.OP1/1 2.75 ARG35:G.NH1/1
DA39:I.OP1/1 2.86 VAL43:G.N/1
DA39:I.OP2/1 2.31 ARG35:G.NH2/1
DG48:I.OP1/1 2.76 TYR37:H.OH/1
DT49:I.OP1/1 3.11 ARG29:G.NH1/1
DT49:I.OP1/1 2.8 ARG29:G.NH2/1
DT49:I.OP1/1 3.18 SER33:H.N/1
DA50:I.OP1/1 2.99 LYS31:H.N/1
DC58:I.OP1/1 3.34 ARG77:G.N/1
DG70:I.OP1/1 2.98 ARG42:A.N/1
DG70:I.OP1/1 2.93 THR45:A.OG1/1
DA-54:J.OP1/1 3.12 SER53:H.N/1
DT-53:J.OP1/1 2.69 TYR39:H.OH/1
DT-53:J.OP1/1 3.34 ILE51:H.N/1
DA-44:J.OP1/1 2.45 ARG32:G.NH1/1
DA-43:J.OP1/1 3.14 ARG17:G.N/1
DA-43:J.OP2/1 3.24 ARG17:G.NE/1
DG-42:J.OP1/1 2.94 LYS15:G.N/1
DG-42:J.OP2/1 2.88 ARG20:G.NH2/1
DG-34:J.OP1/1 2.86 SER84:H.N/1
DG-34:J.OP1/1 2.67 THR85:H.OG1/1
DC-23:J.OP1/1 2.98 ARG72:E.NH1/1
DC-23:J.OP1/1 3.11 ARG72:E.NH2/1
DC-23:J.OP1/1 2.66 PHE84:E.N/1
DC-23:J.OP2/1 3.11 ARG72:E.NH2/1
DC-13:J.OP1/1 3.14 ARG36:F.NH2/1
DC-13:J.OP2/1 2.77 ARG36:F.NH1/1
DG-5:J.OP1/1 3.12 ARG42:E.NH2/1
DT-3:J.OP1/1 2.81 VAL117:E.N/1
DT-3:J.OP1/1 2.56 THR118:E.OG1/1
DG7:J.OP2/1 2.48 GLY48:B.N/1
DA8:J.OP1/1 2.74 ILE46:B.N/1
DA8:J.OP2/1 2.53 ARG35:B.NH2/1
DA8:J.O3'/1 3.03 GLY44:A.N/1
DA9:J.OP1/1 2.83 GLY44:A.N/1
DA9:J.OP1/1 2.86 VAL46:A.N/1
DA9:J.OP1/1 3.04 ALA47:A.N/1
DA9:J.N3/1 2.82 ARG40:A.NH2/1
DC10:J.OP1/1 2.88 TYR41:A.N/1
DT17:J.OP1/1 3.26 ARG69:A.NH2/1
DT17:J.OP2/1 3.04 ARG69:A.NH1/1
DT18:J.OP1/1 2.73 ARG63:A.NH2/1
DT18:J.OP1/1 3.03 LYS64:A.N/1
DT18:J.OP2/1 2.95 LEU65:A.N/1
DA28:J.OP1/1 2.7 LYS79:B.N/1
DA28:J.OP1/1 3.07 THR80:B.N/1
DA28:J.OP1/1 2.98 THR80:B.OG1/1
DA28:J.O5'/1 2.97 THR80:B.OG1/1
DT38:J.OP1/1 3.24 ALA45:C.N/1
DA39:J.OP1/1 3.13 VAL43:C.N/1
DG48:J.OP1/1 2.56 TYR37:D.OH/1
DT49:J.OP1/1 2.65 ARG29:C.NH2/1
DT49:J.OP1/1 3.2 SER33:D.N/1
DA50:J.OP1/1 3.06 THR29:D.O/1
DA50:J.OP1/1 3.11 LYS31:D.N/1
DG51:J.OP1/1 2.81 LYS28:D.N/1
DC58:J.OP1/1 3.11 THR76:C.N/1
DC58:J.OP1/1 2.9 ARG77:C.N/1
DC58:J.OP2/1 3.3 THR76:C.N/1
DG70:J.OP1/1 2.65 ARG42:E.N/1
DG70:J.OP1/1 2.65 THR45:E.OG1/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text