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Nucleic atom dist Protein atom
DC2:T.OP1/1 3.25 ASN572:A.ND2/1
DA3:T.OP2/1 2.56 SER360:A.OG/1
DA3:T.OP2/1 3.18 ILE362:A.N/1
DA3:T.O3'/1 3.29 ASN572:A.ND2/1
DG4:T.OP1/1 2.92 ASN572:A.ND2/1
DT6:T.OP1/1 2.89 GLY393:A.N/1
DA7:T.OP1/1 2.81 LYS705:A.NZ/1
DG12:T.OP1/1 2.76 LYS844:A.NZ/1
DT13:T.OP1/1 2.98 LYS800:A.N/1
DT108:P.O2/1 3.09 LYS800:A.NZ/1
DC110:P.OP1/1 3.13 LYS790:A.NZ/1
DC110:P.OP1/1 2.67 TYR791:A.OH/1
DT111:P.OP1/1 2.96 HIS804:A.NE2/1
DT111:P.OP2/1 3.12 ASN786:A.ND2/1
DT112:P.OP1/1 3.17 SER784:A.N/1
DT112:P.OP2/1 2.62 SER784:A.OG/1
DA113:P.OP1/1 2.77 SER735:A.N/1
DA113:P.OP1/1 2.63 SER735:A.OG/1
DA113:P.OP2/1 2.9 ASN284:A.ND2/1
DA113:P.O5'/1 3.22 GLN733:A.O/1
DC114:P.OP1/1 2.8 GLY729:A.N/1
DC114:P.O2/1 2.85 LYS706:A.NZ/1
DC115:P.OP1/1 2.71 TYR708:A.OH/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA3:T.OP1/1 2.76 119:T/1 2.83 PHE359:A.O/1
DG4:T.N3/1 2.59 102:T/1 2.69 TYR567:A.OH/1
DG5:T.OP1/1 2.65 112:T/1 2.8 GLN389:A.O/1
DG5:T.OP1/1 2.74 105:T/1 3.22 TYR391:A.N/1
DG5:T.O4'/1 2.77 102:T/1 2.69 TYR567:A.OH/1
DG5:T.N2/1 3.22 1105:A/1 2.78 ASP621:A.OD1/1
DG5:T.N2/1 3.25 1107:A/1 2.8 THR622:A.OG1/1
DG5:T.N2/1 3.22 1105:A/1 2.85 LYS706:A.NZ/1
DG5:T.N3/1 2.93 101:T/1 3 ALA394:A.N/1
DA7:T.OP1/1 2.62 103:T/1 2.77 VAL396:A.N/1
DA8:T.OP1/1 2.5 130:T/1 2.74 GLU398:A.OE1/1
DA8:T.OP1/1 2.56 106:T/1 2.9 GLU398:A.OE2/1
DA8:T.OP1/1 2.56 106:T/1 2.85 LYS705:A.N/1
DG9:T.OP1/1 2.55 113:T/1 2.87 THR703:A.OG1/1
DC10:T.OP1/1 2.74 1312:A/1 2.56 LYS874:A.O/1
DG12:T.OP1/1 2.74 1116:A/1 2.68 ARG806:A.NE/1
DT13:T.OP1/1 2.54 1356:A/1 2.49 GLY798:A.O/1
DC110:P.OP1/1 2.67 203:P/1 2.72 ASN787:A.ND2/1
DT111:P.OP1/1 3.06 1128:A/1 2.81 ASN786:A.O/1
DT112:P.OP1/1 2.62 201:P/1 2.68 SER735:A.OG/1
DT112:P.OP1/1 2.62 201:P/1 2.92 LYS829:A.NZ/1
DT112:P.OP2/1 2.8 204:P/1 3.08 ASN284:A.ND2/1
DA113:P.OP1/1 2.75 235:P/1 2.85 GLN733:A.O/1
DC114:P.OP1/1 2.62 208:P/1 2.97 GLN733:A.NE2/1
DC114:P.O3'/1 3.14 1112:A/1 2.53 TYR619:A.OH/1
DC114:P.O3'/1 3.14 1112:A/1 2.65 ASP621:A.OD2/1
DC115:P.OP1/1 2.89 1112:A/1 2.53 TYR619:A.OH/1
DC115:P.OP1/1 2.89 1112:A/1 2.65 ASP621:A.OD2/1
DC115:P.OP1/1 2.65 1218:A/1 2.56 SER624:A.OG/1
DC115:P.OP1/1 2.65 1218:A/1 2.91 TYR626:A.OH/1
DC115:P.O2/1 2.85 1107:A/1 2.8 THR622:A.OG1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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