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Nucleic atom dist Protein atom
DA3:T.OP2/1 2.64 SER360:A.OG/1
DA3:T.OP2/1 3.19 ILE362:A.N/1
DA3:T.O3'/1 3.15 ASN572:A.ND2/1
DG4:T.OP1/1 2.98 ASN572:A.ND2/1
U6:T.OP1/1 2.83 GLY393:A.N/1
DA7:T.OP1/1 2.78 LYS705:A.NZ/1
DG9:T.OP1/1 3.13 ARG707:A.NH1/1
DA11:T.OP1/1 2.94 LYS874:A.NZ/1
DG12:T.OP1/1 2.91 LYS844:A.NZ/1
DT13:T.OP1/1 2.87 LYS800:A.N/1
DT108:P.O2/1 2.88 LYS800:A.NZ/1
DC110:P.OP1/1 3.31 LYS790:A.NZ/1
DC110:P.OP1/1 2.63 TYR791:A.OH/1
DT111:P.OP1/1 3.32 ASN786:A.N/1
DT111:P.OP1/1 2.91 HIS804:A.NE2/1
DT111:P.OP2/1 2.92 ASN786:A.ND2/1
DT112:P.OP1/1 3.07 SER784:A.N/1
DT112:P.OP2/1 2.71 SER784:A.OG/1
DA113:P.OP1/1 2.79 SER735:A.N/1
DA113:P.OP1/1 2.77 SER735:A.OG/1
DA113:P.OP2/1 2.92 ASN284:A.ND2/1
DC114:P.OP1/1 2.78 GLY729:A.N/1
DC114:P.O2/1 2.79 LYS706:A.NZ/1
DC115:P.OP1/1 2.92 TYR708:A.OH/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA3:T.OP1/1 2.81 136:T/1 3.01 PHE359:A.O/1
DG4:T.N2/1 3.37 1274:A/1 2.75 TYR416:A.OH/1
DG4:T.N3/1 2.79 1101:A/1 2.59 TYR567:A.OH/1
DG5:T.OP1/1 2.62 129:T/1 3.08 GLN389:A.O/1
DG5:T.OP1/1 2.79 118:T/1 3.04 TYR391:A.N/1
DG5:T.O4'/1 2.68 1101:A/1 2.59 TYR567:A.OH/1
DG5:T.N2/1 3.13 1113:A/1 2.93 ASP621:A.OD1/1
DG5:T.N2/1 3.33 1120:A/1 2.68 THR622:A.OG1/1
DG5:T.N2/1 3.13 1113:A/1 2.95 LYS706:A.NZ/1
DG5:T.N3/1 2.81 103:T/1 3.05 ALA394:A.N/1
DA7:T.OP1/1 2.66 109:T/1 2.97 VAL396:A.N/1
DA8:T.OP1/1 2.86 135:T/1 3.03 GLU398:A.OE1/1
DA8:T.OP1/1 2.73 125:T/1 2.87 GLU398:A.OE2/1
DA8:T.OP1/1 2.73 125:T/1 2.74 LYS705:A.N/1
DA8:T.N3/1 2.87 1443:A/1 2.69 LYS734:A.NZ/1
DG9:T.OP1/1 2.6 123:T/1 3.09 THR703:A.OG1/1
DG9:T.OP1/1 2.6 123:T/1 3.02 ARG707:A.NH1/1
DC10:T.OP1/1 2.75 1266:A/1 2.47 LYS874:A.O/1
DG12:T.OP1/1 2.85 1389:A/1 2.7 CYS801:A.O/1
DG12:T.OP1/1 2.85 1389:A/1 2.93 ARG806:A.NE/1
DG12:T.OP2/1 3.17 1264:A/1 2.71 LYS844:A.NZ/1
DC110:P.OP1/1 2.75 210:P/1 2.75 ASN787:A.ND2/1
DT111:P.OP1/1 2.85 1144:A/1 2.84 ASN786:A.O/1
DT111:P.O2/1 2.63 207:P/1 2.66 LYS734:A.NZ/1
DT112:P.OP1/1 2.72 1103:A/1 2.72 SER735:A.OG/1
DT112:P.OP1/1 2.72 1103:A/1 2.81 LYS829:A.NZ/1
DT112:P.OP2/1 2.79 204:P/1 2.97 ASN284:A.ND2/1
DT112:P.O4'/1 3.14 207:P/1 2.66 LYS734:A.NZ/1
DC114:P.OP1/1 2.64 206:P/1 2.84 GLN733:A.NE2/1
DC114:P.O3'/1 2.94 1109:A/1 2.72 TYR619:A.OH/1
DC114:P.O3'/1 2.94 1109:A/1 2.6 ASP621:A.OD2/1
DC115:P.OP1/1 2.73 1109:A/1 2.72 TYR619:A.OH/1
DC115:P.OP1/1 2.73 1109:A/1 2.6 ASP621:A.OD2/1
DC115:P.OP1/1 2.87 1166:A/1 2.64 SER624:A.OG/1
DC115:P.OP1/1 2.87 1166:A/1 3.15 TYR626:A.OH/1
DC115:P.O2/1 2.77 1120:A/1 2.68 THR622:A.OG1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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