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Nucleic atom dist Protein atom
DG6:T.OP2/1 3.19 LYS280:A.NZ/1
DG7:T.OP1/1 2.65 THR292:A.OG1/1
DG7:T.O4'/1 2.49 ARG283:A.NH1/1
DG9:T.OP1/1 3.05 TYR296:A.OH/1
DC10:T.OP1/1 2.94 THR233:A.N/1
DC10:T.OP1/1 2.89 LYS234:A.N/1
DA11:T.OP1/1 3.12 LYS230:A.N/1
DC8:P.OP1/1 3.07 GLY107:A.N/1
DC8:P.OP1/1 2.86 ALA110:A.N/1
DC8:P.OP2/1 3.02 SER109:A.N/1
DG9:P.OP1/1 2.78 GLY105:A.N/1
DC10:P.OP1/1 3.08 ARG254:A.NH2/1
DC10:P.O2/1 2.77 TYR271:A.OH/1
DC11:P.OP1/1 2.87 ASP190:A.OD1/1
DC11:P.OP1/1 3.07 ASP192:A.OD1/1
DC11:P.OP1/1 3 ASP192:A.OD2/1
DC11:P.O2/1 2.81 ASN279:A.ND2/1
DG1:D.OP1/1 2.9 LYS68:A.NZ/1
DT2:D.OP1/1 2.69 GLY66:A.N/1
DT2:D.OP1/1 3.02 ILE69:A.N/1
DT2:D.OP2/1 3.16 LYS68:A.N/1
DC3:D.OP1/1 2.81 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC5:T.O2/1 3.11 213:T/1 3.13 HIS34:A.O/1
DG6:T.OP1/1 3.17 582:A/1 2.81 HIS34:A.ND1/1
DG6:T.OP1/1 3.17 582:A/1 2.94 ASN37:A.ND2/1
DG6:T.N7/1 2.86 228:T/1 3.33 ASN37:A.ND2/1
DG6:T.N7/1 2.86 228:T/1 3.14 LYS280:A.NZ/1
DG7:T.OP1/1 2.85 204:T/1 2.88 ARG283:A.O/1
DG7:T.OP1/1 2.85 204:T/1 2.99 ILE293:A.N/1
DG7:T.N2/1 3.18 548:A/1 3.26 ARG258:A.NH1/1
DG7:T.N2/1 3.18 548:A/1 2.55 GLU295:A.OE2/1
DG7:T.N3/1 2.92 514:A/1 2.8 ARG283:A.NH1/1
DG7:T.N3/1 2.92 514:A/1 2.54 GLU295:A.OE1/1
DG9:T.O4'/1 2.92 209:T/1 3.38 ARG258:A.NH1/1
DG9:T.N2/1 3 202:T/1 3.07 SER229:A.OG/1
DG9:T.N2/1 3 202:T/1 2.93 LYS234:A.NZ/1
DC10:T.OP2/1 2.75 208:T/1 3.08 GLU232:A.N/1
DC10:T.OP2/1 2.75 208:T/1 3.08 GLU232:A.N/1
DC10:T.OP2/1 2.75 243:T/1 3.01 THR233:A.OG1/1
DA11:T.OP2/1 2.58 212:T/1 2.93 LYS230:A.O/1
DT12:T.OP1/1 2.64 206:T/1 2.93 HIS134:A.N/1
DT12:T.OP1/1 3.03 201:T/1 3.07 HIS135:A.N/1
DG9:P.OP2/1 2.91 212:P/1 3.24 LYS27:A.NZ/1
DG9:P.OP2/1 2.58 203:P/1 3.19 THR101:A.O/1
DG9:P.N3/1 2.74 202:P/1 3.15 LYS234:A.NZ/1
DC10:P.OP1/1 2.89 518:A/1 2.84 SER104:A.OG/1
DC10:P.OP1/1 2.89 518:A/1 2.82 ARG254:A.NE/1
DC10:P.O4'/1 2.93 202:P/1 3.15 LYS234:A.NZ/1
DC11:P.OP1/1 3.06 503:A/1 2.59 ASP190:A.OD1/1
DG1:D.OP1/1 3.21 705:A/1 2.83 TYR39:A.OH/1
DG1:D.N2/1 3.31 213:T/1 3.13 HIS34:A.O/1
DC3:D.OP2/1 2.82 103:D/1 3.12 LYS60:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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