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Nucleic atom dist Protein atom
DC3:G.OP1/1 2.95 ARG180:B.NH2/1
DC8:G.OP1/1 3.35 LYS323:D.NZ/1
DT10:G.OP1/1 2.92 LYS335:D.NZ/1
DG11:G.OP1/1 2.53 LYS395:B.NZ/1
DT12:G.O3'/1 3.46 ARG161:B.N/1
DA13:G.O4'/1 3.01 ARG161:B.NH1/1
DT10:H.OP1/1 2.29 SER165:B.OG/1
DG11:H.OP1/1 2.91 TYR200:B.OH/1
DG11:H.OP2/1 3.11 ASN172:B.ND2/1
DT12:H.OP1/1 2.55 LYS372:B.NZ/1
DT12:H.OP2/1 2.82 ASN196:B.ND2/1
DA7:K.OP1/1 2.43 ARG180:D.NH2/1
DA15:K.OP1/1 2.46 LYS335:B.NZ/1
DG16:K.OP1/1 3.02 LYS395:D.NZ/1
DA17:K.O3'/1 3.19 ARG161:D.N/1
DA17:K.N3/1 3.49 ARG161:D.NE/1
DA17:K.N3/1 3.35 ARG161:D.NH2/1
DT18:K.OP1/1 2.93 ARG161:D.N/1
DT6:L.OP1/1 2.9 TYR200:D.OH/1
DT6:L.OP2/1 3.05 ASN172:D.ND2/1
DA7:L.OP1/1 2.49 LYS372:D.NZ/1
DA7:L.OP2/1 2.71 ASN196:D.ND2/1
DT12:L.OP2/1 3.35 ARG222:B.NE/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA7:G.N3/1 3.1 725:D/1 2.72 ARG342:D.NH2/1
DC8:G.OP1/1 3.05 781:D/1 3.1 ARG337:D.NH1/1
DT10:G.OP1/1 3.03 817:B/1 2.25 ASN376:B.O/1
DT10:G.OP2/1 1.88 115:G/1 3.19 SER387:B.N/1
DT12:G.OP1/1 2.77 709:B/1 2.72 LEU159:B.N/1
DT12:H.O2/1 2.33 102:H/1 2.64 ARG342:D.NH2/1
DA13:H.O4'/1 2.89 102:H/1 2.64 ARG342:D.NH2/1
DA13:H.N3/1 2.88 712:D/1 2.84 ARG342:D.NE/1
DC14:H.OP1/1 3.13 794:D/1 3.07 ASN339:D.OD1/1
DG11:K.O3'/1 2.52 752:B/1 2.42 SER317:B.OG/1
DT12:K.OP1/1 2.72 752:B/1 2.42 SER317:B.OG/1
DA13:K.OP1/1 2.85 104:K/1 3.29 ARG341:B.NE/1
DA15:K.OP2/1 2.62 742:D/1 2.31 CYS385:D.O/1
DA17:K.OP1/1 2.88 773:D/1 2.65 LYS399:D.NZ/1
DT6:L.OP1/1 2.51 727:D/1 2.47 ASN172:D.OD1/1
DT6:L.OP1/1 2.51 727:D/1 3.21 TYR201:D.OH/1
DG11:L.OP2/1 2.8 112:L/1 2.92 LYS315:B.NZ/1

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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