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Nucleic atom dist Protein atom
DT4:T.OP2/1 2.46 SER360:A.OG/1
DT4:T.OP2/1 3.08 ILE362:A.N/1
DT4:T.O3'/1 3.07 ASN572:A.ND2/1
DG5:T.OP1/1 2.96 ASN572:A.ND2/1
DG7:T.OP1/1 2.97 GLY393:A.N/1
DA8:T.OP1/1 2.7 LYS705:A.NZ/1
DT13:T.OP1/1 2.77 LYS844:A.NZ/1
DC14:T.OP1/1 2.79 LYS800:A.N/1
DC111:P.OP1/1 3.29 ASN786:A.ND2/1
DT112:P.OP1/1 2.96 SER784:A.N/1
DT112:P.OP2/1 2.92 SER784:A.OG/1
DT113:P.OP1/1 2.8 SER735:A.N/1
DT113:P.OP2/1 2.26 ASN284:A.ND2/1
DA114:P.OP1/1 3.12 GLY729:A.N/1
DA114:P.N3/1 3.04 LYS706:A.NZ/1
DC115:P.OP1/1 2.63 TYR708:A.OH/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA3:T.OP2/1 3.22 1264:A/1 2.89 SER357:A.OG/1
DT6:T.OP1/1 2.65 109:T/1 3.14 TYR391:A.N/1
DT6:T.O2/1 2.75 102:T/1 3.01 ALA394:A.N/1
DG7:T.O4'/1 2.79 101:T/1 2.9 LYS706:A.NZ/1
DA8:T.OP1/1 2.69 106:T/1 2.87 VAL396:A.N/1
DG9:T.OP1/1 2.58 112:T/1 2.66 GLU398:A.OE1/1
DG9:T.OP1/1 2.57 103:T/1 2.67 GLU398:A.OE2/1
DG9:T.OP1/1 2.57 103:T/1 2.92 LYS705:A.N/1
DC10:T.OP1/1 3.02 1440:A/1 2.83 THR703:A.OG1/1
DA11:T.OP1/1 2.79 1168:A/1 2.57 LYS874:A.O/1
DT13:T.OP1/1 2.59 113:T/1 2.78 CYS801:A.O/1
DT13:T.OP1/1 2.59 113:T/1 2.78 ARG806:A.NE/1
DT112:P.OP1/1 2.81 206:P/1 3 SER735:A.OG/1
DT113:P.OP1/1 2.51 205:P/1 3.06 GLN733:A.O/1
DA114:P.OP1/1 2.56 202:P/1 2.95 GLN733:A.NE2/1
DA114:P.O3'/1 3.17 1160:A/1 2.51 TYR619:A.OH/1
DA114:P.O3'/1 3.17 1160:A/1 2.66 ASP621:A.OD2/1
DC115:P.OP1/1 2.87 1160:A/1 2.51 TYR619:A.OH/1
DC115:P.OP1/1 2.87 1160:A/1 2.66 ASP621:A.OD2/1
DC115:P.OP1/1 2.71 1125:A/1 2.97 SER624:A.OG/1
DC115:P.OP1/1 2.71 1125:A/1 2.57 TYR626:A.OH/1
DC115:P.OP2/1 2.76 201:P/1 2.85 LYS726:A.NZ/1
DC115:P.O2/1 2.78 1217:A/1 2.65 THR622:A.OG1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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