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Nucleic atom dist Protein atom
DG9:T.N3/1 3.16 LYS234:A.NZ/1
DC10:T.OP1/1 2.9 THR233:A.N/1
DC10:T.OP1/1 2.9 LYS234:A.N/1
DA11:T.OP1/1 2.98 LYS230:A.N/1
DC8:P.OP1/1 3.02 GLY107:A.N/1
DC8:P.OP1/1 2.96 ALA110:A.N/1
DC8:P.OP2/1 2.99 SER109:A.N/1
DG9:P.OP1/1 2.65 GLY105:A.N/1
DC10:P.OP1/1 3.09 ARG254:A.NE/1
DC10:P.OP1/1 2.97 ARG254:A.NH2/1
DT2:D.OP1/1 2.84 GLY66:A.N/1
DT2:D.OP1/1 2.89 ILE69:A.N/1
DT2:D.OP2/1 3.04 LYS68:A.N/1
DC3:D.OP1/1 2.85 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC5:T.O2/1 2.84 562:A/1 2.79 HIS34:A.O/1
DC8:T.O2/1 2.92 115:T/1 2.83 LYS234:A.NZ/1
DC8:T.O2/1 2.75 115:T/1 2.83 LYS234:A.NZ/1
DG9:T.O4'/1 3.06 115:T/1 2.83 LYS234:A.NZ/1
DC10:T.OP2/1 2.77 105:T/1 2.82 GLU232:A.N/1
DC10:T.OP2/1 2.89 676:A/1 2.72 THR233:A.OG1/1
DA11:T.O3'/1 3.07 101:T/1 3.03 HIS135:A.N/1
DT12:T.OP1/1 2.4 102:T/1 2.89 HIS134:A.N/1
DT12:T.OP1/1 2.85 101:T/1 3.03 HIS135:A.N/1
DG9:P.OP2/1 2.76 101:P/1 3.07 THR101:A.O/1
DG9:P.N3/1 2.65 109:P/1 3.43 LYS234:A.NZ/1
DC10:P.OP1/1 2.87 504:A/1 2.58 SER104:A.OG/1
DC10:P.OP1/1 2.5 108:P/1 2.55 ASP190:A.OD2/1
DC10:P.OP1/1 2.87 504:A/1 2.89 ARG254:A.NE/1
DC10:P.O3'/1 3.08 651:A/1 2.6 ASP190:A.OD2/1
DC10:P.O3'/1 3.08 651:A/1 2.24 ASP192:A.OD1/1
DG1:D.O5'/1 3.02 108:D/1 3.32 LYS35:A.NZ/1
DG1:D.N2/1 3.35 562:A/1 2.79 HIS34:A.O/1
DC3:D.OP2/1 2.81 111:D/1 3.04 LYS60:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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