|
Nucleic atom
|
dist
|
Protein atom
|
|
DG9:T.N3/1
|
3.16
|
LYS234:A.NZ/1
|
|
DC10:T.OP1/1
|
2.9
|
THR233:A.N/1
|
|
DC10:T.OP1/1
|
2.9
|
LYS234:A.N/1
|
|
DA11:T.OP1/1
|
2.98
|
LYS230:A.N/1
|
|
DC8:P.OP1/1
|
3.02
|
GLY107:A.N/1
|
|
DC8:P.OP1/1
|
2.96
|
ALA110:A.N/1
|
|
DC8:P.OP2/1
|
2.99
|
SER109:A.N/1
|
|
DG9:P.OP1/1
|
2.65
|
GLY105:A.N/1
|
|
DC10:P.OP1/1
|
3.09
|
ARG254:A.NE/1
|
|
DC10:P.OP1/1
|
2.97
|
ARG254:A.NH2/1
|
|
DT2:D.OP1/1
|
2.84
|
GLY66:A.N/1
|
|
DT2:D.OP1/1
|
2.89
|
ILE69:A.N/1
|
|
DT2:D.OP2/1
|
3.04
|
LYS68:A.N/1
|
|
DC3:D.OP1/1
|
2.85
|
GLY64:A.N/1
|
|
|
|
Nucleic atom
|
d_n2w
|
water
|
d_p2w
|
Protein atom
|
|
DC5:T.O2/1
|
2.84
|
562:A/1
|
2.79
|
HIS34:A.O/1
|
|
DC8:T.O2/1
|
2.92
|
115:T/1
|
2.83
|
LYS234:A.NZ/1
|
|
DC8:T.O2/1
|
2.75
|
115:T/1
|
2.83
|
LYS234:A.NZ/1
|
|
DG9:T.O4'/1
|
3.06
|
115:T/1
|
2.83
|
LYS234:A.NZ/1
|
|
DC10:T.OP2/1
|
2.77
|
105:T/1
|
2.82
|
GLU232:A.N/1
|
|
DC10:T.OP2/1
|
2.89
|
676:A/1
|
2.72
|
THR233:A.OG1/1
|
|
DA11:T.O3'/1
|
3.07
|
101:T/1
|
3.03
|
HIS135:A.N/1
|
|
DT12:T.OP1/1
|
2.4
|
102:T/1
|
2.89
|
HIS134:A.N/1
|
|
DT12:T.OP1/1
|
2.85
|
101:T/1
|
3.03
|
HIS135:A.N/1
|
|
DG9:P.OP2/1
|
2.76
|
101:P/1
|
3.07
|
THR101:A.O/1
|
|
DG9:P.N3/1
|
2.65
|
109:P/1
|
3.43
|
LYS234:A.NZ/1
|
|
DC10:P.OP1/1
|
2.87
|
504:A/1
|
2.58
|
SER104:A.OG/1
|
|
DC10:P.OP1/1
|
2.5
|
108:P/1
|
2.55
|
ASP190:A.OD2/1
|
|
DC10:P.OP1/1
|
2.87
|
504:A/1
|
2.89
|
ARG254:A.NE/1
|
|
DC10:P.O3'/1
|
3.08
|
651:A/1
|
2.6
|
ASP190:A.OD2/1
|
|
DC10:P.O3'/1
|
3.08
|
651:A/1
|
2.24
|
ASP192:A.OD1/1
|
|
DG1:D.O5'/1
|
3.02
|
108:D/1
|
3.32
|
LYS35:A.NZ/1
|
|
DG1:D.N2/1
|
3.35
|
562:A/1
|
2.79
|
HIS34:A.O/1
|
|
DC3:D.OP2/1
|
2.81
|
111:D/1
|
3.04
|
LYS60:A.NZ/1
|
|
|
Hbonds:
Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
Protein atom is atom of protein in Jmol/RasMol format.
Dist is distance from nucleic atom to protein atom in angstroms (Å).
W-Bridges:
W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
Protein atom is atom of protein in Jmol/RasMol format.
Water is water molecule.
d_n2w is distance from nucleic atom to water molecule (Å).
d_p2w is distance from protein atom to water molecule (Å).
CluD:
CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
Core number is serial number of cluster.
Atoms is number of detected atoms in the cluster.
