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Nucleic atom dist Protein atom
DC10:T.OP1/1 2.88 THR233:A.N/1
DC10:T.OP1/1 3.01 LYS234:A.N/1
DA11:T.OP1/1 2.99 LYS230:A.N/1
DC8:P.OP1/1 3.2 GLY107:A.N/1
DC8:P.OP1/1 2.92 ALA110:A.N/1
DC8:P.OP2/1 2.8 SER109:A.N/1
DG9:P.OP1/1 2.7 GLY105:A.N/1
DA10:P.OP1/1 3.08 ARG254:A.NH2/1
DG1:D.OP1/1 2.47 LYS68:A.NZ/1
DG1:D.OP2/1 2.88 LYS68:A.NZ/1
DT2:D.OP1/1 2.81 GLY66:A.N/1
DT2:D.OP1/1 3.02 ILE69:A.N/1
DT2:D.OP2/1 3.12 LYS68:A.N/1
DC3:D.OP1/1 2.74 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC10:T.OP2/1 2.55 107:T/1 2.8 GLU232:A.N/1
DT12:T.OP1/1 2.59 101:T/1 2.67 HIS134:A.N/1
DA10:P.OP1/1 2.91 511:A/1 2.66 SER104:A.OG/1
DA10:P.OP1/1 2.91 511:A/1 3.24 ARG254:A.NE/1
DA10:P.O3'/1 2.61 104:P/1 2.65 ASP190:A.OD2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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