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Nucleic atom dist Protein atom
DC5:P.O3'/1 3.37 LYS303:A.NZ/1
DT6:P.OP1/1 3.32 LYS303:A.NZ/1
DG7:P.OP2/1 2.8 LYS301:A.N/1
DA8:P.OP1/1 3.11 LYS298:A.NZ/1
DA8:P.OP2/1 2.71 GLY299:A.N/1
DT9:P.OP1/1 3.43 ARG325:A.NH2/1
DT9:P.OP2/1 3.3 SER297:A.N/1
DG13:P.OP1/1 3.01 LYS153:A.NZ/1
DG13:P.O3'/1 3.27 GLU106:A.OE2/1
DG5:T.OP1/1 2.72 ARG332:A.NH2/1
DG5:T.OP2/1 3.1 ARG332:A.NE/1
DG5:T.OP2/1 2.9 ARG333:A.NH1/1
DC6:T.OP2/1 2.74 THR251:A.OG1/1
DC7:T.OP2/1 2.84 ARG248:A.NH1/1
DC7:T.OP2/1 2.56 TYR249:A.N/1
DC8:T.OP1/1 3.24 ARG243:A.NE/1
DC8:T.OP1/1 3.26 LYS276:A.NZ/1
DC8:T.OP2/1 2.56 GLY247:A.N/1
DT9:T.OP1/1 3.01 LYS244:A.N/1
DT9:T.OP2/1 3.22 SER245:A.N/1
DT9:T.OP2/1 2.72 SER245:A.OG/1
DT12:T.OP1/1 2.89 ALA221:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC6:T.OP1/1 2.75 101:T/1 3 ARG248:A.NH1/1
DC6:T.OP1/1 2.75 101:T/1 2.82 TYR249:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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