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Nucleic atom dist Protein atom
DG2:P.N2/1 2.83 ASN1164:A.OD1/1
DT5:P.OP2/1 2.75 THR1110:A.OG1/1
DG7:P.OP1/1 3.02 LYS872:A.N/1
DC8:T.OP1/1 2.82 LYS1122:A.N/1
DC8:T.OP2/1 2.84 SER1121:A.OG/1
DG14:T.O3'/1 3.18 GLN1166:A.OE1/1
DG14:T.N3/1 2.84 GLN1166:A.NE2/1
DT16:T.OP1/1 2.82 ARG1000:A.NE/1
DT16:T.OP2/1 3.19 ARG1000:A.NH2/1
DC17:T.OP1/1 2.94 ARG898:A.N/1
DC17:T.O2/1 2.94 LYS968:A.NZ/1
DC17:T.N4/1 3.05 LEU1004:A.O/1
DC17:T.N4/1 3.26 GLU1008:A.OE1/1
DT18:T.OP1/1 2.87 ALA920:A.N/1
DT18:T.OP1/1 2.68 THR946:A.OG1/1
DT18:T.OP2/1 2.78 ARG898:A.NE/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG4:P.N3/1 3.05 1452:A/1 2.8 GLN1166:A.NE2/1
DT5:P.OP1/1 2.6 101:P/1 3.03 ALA1169:A.N/1
DC17:T.OP1/1 2.66 101:T/1 3.18 ARG899:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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