Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DA23:M.OP2/1 2.81 SER274:D.OG/1
DA23:M.O5'/1 2.54 SER274:D.OG/1
DG24:M.O3'/1 2.67 SER16:D.OG/1
DG25:M.OP1/1 2.85 SER16:D.OG/1
DG25:M.OP1/1 2.97 ARG34:D.NH1/1
DG25:M.OP2/1 2.95 ARG34:D.NH2/1
DC26:M.OP1/1 3.15 SER20:D.N/1
DC2:N.OP1/1 2.41 TYR570:F.OH/1
DC2:N.OP2/1 2.45 LYS621:F.NZ/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text