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Nucleic atom dist Protein atom
DG2:G.OP1/1 3.06 ARG236:B.NH1/1
DC5:G.OP1/1 2.77 GLN373:B.OE1/1
DC5:G.N4/1 3.07 ASP335:B.OD2/1
DC6:G.OP1/1 2.88 GLN407:B.NE2/1
DT7:G.OP1/1 2.5 GLN441:B.NE2/1
DT8:G.OP1/1 3.07 GLN475:B.NE2/1
DA10:G.OP1/1 2.99 GLN543:B.OE1/1
DT11:G.OP1/1 3.01 GLN577:B.NE2/1
DC12:G.OP1/1 3.32 GLN611:B.NE2/1
DC12:G.N4/1 2.65 ASP573:B.OD2/1
DT15:G.OP1/1 2.16 ARG712:B.NH2/1
DA8:H.OP1/1 3.35 ARG266:B.NH1/1
DA8:H.O5'/1 3.11 ARG266:B.NH1/1
DA9:H.OP1/1 3.43 LYS265:B.NZ/1
DA9:H.OP2/1 3.06 ARG266:B.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC4:G.OP2/1 2.54 101:G/1 3.18 GLY302:B.O/1
DC4:G.OP2/1 2.54 101:G/1 3.02 LYS338:B.N/1
DC5:G.OP2/1 2.66 102:G/1 2.96 LYS372:B.N/1
DC6:G.OP2/1 2.13 103:G/1 2.99 ASP369:B.O/1
DC6:G.OP2/1 2.13 103:G/1 2.57 GLY404:B.N/1
DC6:G.OP2/1 3.03 804:B/1 2.42 LYS406:B.N/1
DA10:G.OP2/1 2.78 805:B/1 2.68 GLY506:B.O/1
DA10:G.OP2/1 2.78 805:B/1 2.65 GLY541:B.N/1
DA10:G.OP2/1 2.78 805:B/1 3 LYS542:B.N/1
DT11:G.OP2/1 2.73 104:G/1 3.15 LYS576:B.N/1
DT13:G.OP2/1 3.05 809:B/1 2.09 GLY642:B.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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