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Nucleic atom dist Protein atom
DT4:C.OP1/1 2.96 GLY106:A.N/1
DT4:C.OP1/1 2.75 ALA109:A.N/1
DT4:C.OP2/1 3.23 ARG108:A.N/1
DA5:C.OP1/1 2.82 GLY104:A.N/1
DC6:C.OP1/1 2.81 ARG269:A.NH2/1
DT7:C.OP1/1 3.18 ASP271:A.OD2/1
DT7:C.OP2/1 2.69 ASP194:A.OD2/1
DT7:C.O2/1 2.96 ASN294:A.ND2/1
DG1:D.OP1/1 2.71 LYS34:A.NZ/1
DA5:B.OP2/1 3.15 GLN299:A.NE2/1
DA5:B.N3/1 2.86 ARG298:A.NH1/1
DT7:B.OP1/1 2.86 ASN309:A.ND2/1
DT7:B.OP1/1 2.66 GLU338:A.OE1/1
DT7:B.OP2/1 2.92 ALA336:A.N/1
DA8:B.OP1/1 2.61 TYR311:A.OH/1
DA8:B.OP2/1 2.97 ASN335:A.ND2/1
DC9:B.OP1/1 2.8 LEU240:A.N/1
DC9:B.OP1/1 2.85 LYS241:A.N/1
DT10:B.OP1/1 3.05 GLN237:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA2:C.N6/1 2.87 113:C/1 2.88 GLY333:A.O/1
DA5:C.OP2/1 2.87 117:C/1 2.96 THR100:A.O/1
DC6:C.OP1/1 2.7 101:C/1 2.8 HIS103:A.ND1/1
DC6:C.OP1/1 2.7 101:C/1 2.93 ARG269:A.NE/1
DC6:C.OP2/1 2.95 112:C/1 3.19 HIS103:A.ND1/1
DC6:C.O2/1 2.69 114:C/1 2.92 ARG273:A.NH2/1
DT7:C.O3'/1 2.97 103:C/1 3.25 ARG187:A.NH1/1
DG6:B.OP1/1 2.84 105:B/1 2.98 ARG298:A.O/1
DG6:B.OP1/1 2.84 105:B/1 2.9 LEU308:A.N/1
DG6:B.N2/1 3.26 585:A/1 2.86 GLU310:A.OE2/1
DG6:B.N3/1 3.08 566:A/1 3 ARG298:A.NH1/1
DG6:B.N3/1 3.08 566:A/1 2.92 ARG298:A.NH2/1
DG6:B.N3/1 3.08 566:A/1 2.51 GLU310:A.OE1/1
DT7:B.O2/1 2.92 585:A/1 2.86 GLU310:A.OE2/1
DA8:B.OP1/1 2.73 510:A/1 2.73 GLY341:A.N/1
DA8:B.N7/1 3.02 639:A/1 2.79 LYS334:A.O/1
DA8:B.N6/1 3.42 639:A/1 2.79 LYS334:A.O/1
DA8:B.N3/1 2.93 107:B/1 2.78 LYS241:A.NZ/1
DC9:B.O4'/1 2.66 107:B/1 2.78 LYS241:A.NZ/1
DC9:B.O2/1 2.92 586:A/1 2.88 GLN138:A.NE2/1
DT10:B.O4'/1 3.17 586:A/1 2.88 GLN138:A.NE2/1
DG11:B.OP1/1 2.69 106:B/1 2.75 GLN138:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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