Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DG6:T.N3/1 3.44 ARG283:A.NH1/1
DA7:T.OP1/1 2.81 THR292:A.OG1/1
DC8:T.OP1/1 2.95 ASN294:A.ND2/1
DG9:T.OP1/1 2.64 TYR296:A.OH/1
DG9:T.N3/1 2.79 LYS234:A.NZ/1
DC10:T.OP1/1 3.04 THR233:A.N/1
DC10:T.OP1/1 3.07 LYS234:A.N/1
DA11:T.OP1/1 2.95 LYS230:A.N/1
DA11:T.OP1/1 3.04 LYS230:A.O/1
DC8:P.OP1/1 3.2 GLY107:A.N/1
DC8:P.OP1/1 2.8 ALA110:A.N/1
DC8:P.OP2/1 3.16 SER109:A.N/1
DG9:P.OP1/1 2.65 GLY105:A.N/1
DC10:P.OP1/1 2.95 ARG254:A.NH2/1
DC10:P.O2/1 2.86 TYR271:A.OH/1
DC11:P.OP1/1 2.84 ASP190:A.OD2/1
DC11:P.OP1/1 2.9 ASP192:A.OD2/1
DC11:P.O3'/1 3.24 PHE272:A.O/1
DC11:P.O2/1 3 ASN279:A.ND2/1
DG1:D.OP1/1 2.77 LYS68:A.NZ/1
DT2:D.OP1/1 2.96 GLY66:A.N/1
DT2:D.OP1/1 2.83 ILE69:A.N/1
DT2:D.OP2/1 3.24 LYS68:A.N/1
DC3:D.OP1/1 2.97 GLY64:A.N/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DG6:T.O3'/1 3.03 101:T/1 2.78 ARG283:A.O/1
DG6:T.O3'/1 3.03 101:T/1 3.14 ILE293:A.N/1
DG6:T.N7/1 2.81 102:T/1 3.08 ASN37:A.ND2/1
DA7:T.OP1/1 2.75 101:T/1 2.78 ARG283:A.O/1
DA7:T.OP1/1 2.75 101:T/1 3.14 ILE293:A.N/1
DG9:P.OP2/1 2.82 101:P/1 2.86 THR101:A.O/1
DG9:P.N3/1 2.78 105:P/1 3.27 LYS234:A.NZ/1
DC10:P.O4'/1 3.08 105:P/1 3.27 LYS234:A.NZ/1
DC10:P.O2/1 2.84 551:A/1 2.48 TYR271:A.OH/1
DC10:P.N3/1 3.29 551:A/1 2.48 TYR271:A.OH/1
DC11:P.O3'/1 2.71 540:A/1 3.33 ARG183:A.NH1/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

text