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Nucleic atom dist Protein atom
C9:1.O2'/1 2.76 SER19:L.OG/1
U10:1.O2'/1 2.96 HIS15:L.O/1
A26:1.OP1/1 3.01 HIS15:L.NE2/1
A28:1.OP2/1 2.57 LYS3:L.NZ/1
A123:1.O3'/1 3.07 GLU10:D.OE2/1
U124:1.OP2/1 2.9 GLU10:D.OE2/1
A125:1.O4'/1 3.08 HIS62:D.ND1/1
A126:1.OP2/1 2.73 TYR39:F.OH/1
A126:1.N7/1 3.13 GLY38:F.O/1
A126:1.N6/1 2.95 GLY38:F.O/1
U127:1.O4'/1 2.96 ARG63:G.NH2/1
U127:1.O2'/1 2.93 ARG64:A.NH2/1
U127:1.N3/1 3.01 ASN39:G.OD1/1
U127:1.O4/1 3.05 ASN39:G.ND2/1
U128:1.OP1/1 2.8 ASN65:G.OD1/1
U128:1.O4'/1 3.35 ARG64:A.NH2/1
U128:1.O2/1 2.77 SER66:A.N/1
U128:1.N3/1 2.91 ASN40:A.OD1/1
U128:1.N3/1 2.84 ASN40:A.ND2/1
U128:1.O4/1 2.65 ASN40:A.ND2/1
U129:1.O3'/1 3.24 ARG61:C.NH1/1
U129:1.O2'/1 2.75 HIS37:B.ND1/1
U129:1.O2'/1 2.9 ARG61:C.NH1/1
U129:1.O2/1 3.02 GLU75:B.N/1
U129:1.N3/1 3.06 ASN39:B.OD1/1
U129:1.N3/1 3.21 ASN39:B.ND2/1
U129:1.O4/1 2.83 ASN39:B.ND2/1
G130:1.OP1/1 2.71 ARG61:C.NH2/1
U131:1.O4'/1 3 ARG102:D.NH1/1
U131:1.O2'/1 2.83 HIS62:D.ND1/1
U131:1.O2'/1 3.23 ARG65:F.NH1/1
U131:1.O2'/1 3.3 ARG65:F.NH2/1
U131:1.O2/1 2.95 ASP104:D.N/1
U131:1.N3/1 2.98 ASN64:D.OD1/1
U131:1.N3/1 3.05 ASN64:D.ND2/1
U131:1.O4/1 2.65 ASN64:D.ND2/1
G132:1.O6/1 2.39 ARG66:C.NH2/1
G133:1.OP1/1 3.03 LYS24:F.NZ/1
G133:1.OP2/1 2.98 ARG47:D.NH1/1
G133:1.OP2/1 2.64 ASN67:F.ND2/1
G133:1.O5'/1 2.95 ARG47:D.NH2/1
A135:1.O2'/1 2.62 LYS20:C.O/1
A135:1.O2'/1 3.21 ARG66:C.NH2/1
A135:1.N6/1 2.77 GLN36:K.O/1
G136:1.N7/1 2.63 ARG66:C.NH1/1
G136:1.O6/1 2.7 ARG66:C.NH1/1
G136:1.O6/1 3.29 ASN48:D.ND2/1
G136:1.N2/1 3.07 GLU18:C.OE1/1
G136:1.N2/1 3.1 LYS50:D.NZ/1
A1:X.N3/1 3.34 THR14:L.OG1/1
G2:X.O2'/1 2.85 TYR12:L.O/1
A5:X.OP1/1 2.75 ARG28:L.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
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