|
Nucleic atom
|
dist
|
Protein atom
|
|
C9:1.O2'/1
|
2.76
|
SER19:L.OG/1
|
|
U10:1.O2'/1
|
2.96
|
HIS15:L.O/1
|
|
A26:1.OP1/1
|
3.01
|
HIS15:L.NE2/1
|
|
A28:1.OP2/1
|
2.57
|
LYS3:L.NZ/1
|
|
A123:1.O3'/1
|
3.07
|
GLU10:D.OE2/1
|
|
U124:1.OP2/1
|
2.9
|
GLU10:D.OE2/1
|
|
A125:1.O4'/1
|
3.08
|
HIS62:D.ND1/1
|
|
A126:1.OP2/1
|
2.73
|
TYR39:F.OH/1
|
|
A126:1.N7/1
|
3.13
|
GLY38:F.O/1
|
|
A126:1.N6/1
|
2.95
|
GLY38:F.O/1
|
|
U127:1.O4'/1
|
2.96
|
ARG63:G.NH2/1
|
|
U127:1.O2'/1
|
2.93
|
ARG64:A.NH2/1
|
|
U127:1.N3/1
|
3.01
|
ASN39:G.OD1/1
|
|
U127:1.O4/1
|
3.05
|
ASN39:G.ND2/1
|
|
U128:1.OP1/1
|
2.8
|
ASN65:G.OD1/1
|
|
U128:1.O4'/1
|
3.35
|
ARG64:A.NH2/1
|
|
U128:1.O2/1
|
2.77
|
SER66:A.N/1
|
|
U128:1.N3/1
|
2.91
|
ASN40:A.OD1/1
|
|
U128:1.N3/1
|
2.84
|
ASN40:A.ND2/1
|
|
U128:1.O4/1
|
2.65
|
ASN40:A.ND2/1
|
|
U129:1.O3'/1
|
3.24
|
ARG61:C.NH1/1
|
|
U129:1.O2'/1
|
2.75
|
HIS37:B.ND1/1
|
|
U129:1.O2'/1
|
2.9
|
ARG61:C.NH1/1
|
|
U129:1.O2/1
|
3.02
|
GLU75:B.N/1
|
|
U129:1.N3/1
|
3.06
|
ASN39:B.OD1/1
|
|
U129:1.N3/1
|
3.21
|
ASN39:B.ND2/1
|
|
U129:1.O4/1
|
2.83
|
ASN39:B.ND2/1
|
|
G130:1.OP1/1
|
2.71
|
ARG61:C.NH2/1
|
|
U131:1.O4'/1
|
3
|
ARG102:D.NH1/1
|
|
U131:1.O2'/1
|
2.83
|
HIS62:D.ND1/1
|
|
U131:1.O2'/1
|
3.23
|
ARG65:F.NH1/1
|
|
U131:1.O2'/1
|
3.3
|
ARG65:F.NH2/1
|
|
U131:1.O2/1
|
2.95
|
ASP104:D.N/1
|
|
U131:1.N3/1
|
2.98
|
ASN64:D.OD1/1
|
|
U131:1.N3/1
|
3.05
|
ASN64:D.ND2/1
|
|
U131:1.O4/1
|
2.65
|
ASN64:D.ND2/1
|
|
G132:1.O6/1
|
2.39
|
ARG66:C.NH2/1
|
|
G133:1.OP1/1
|
3.03
|
LYS24:F.NZ/1
|
|
G133:1.OP2/1
|
2.98
|
ARG47:D.NH1/1
|
|
G133:1.OP2/1
|
2.64
|
ASN67:F.ND2/1
|
|
G133:1.O5'/1
|
2.95
|
ARG47:D.NH2/1
|
|
A135:1.O2'/1
|
2.62
|
LYS20:C.O/1
|
|
A135:1.O2'/1
|
3.21
|
ARG66:C.NH2/1
|
|
A135:1.N6/1
|
2.77
|
GLN36:K.O/1
|
|
G136:1.N7/1
|
2.63
|
ARG66:C.NH1/1
|
|
G136:1.O6/1
|
2.7
|
ARG66:C.NH1/1
|
|
G136:1.O6/1
|
3.29
|
ASN48:D.ND2/1
|
|
G136:1.N2/1
|
3.07
|
GLU18:C.OE1/1
|
|
G136:1.N2/1
|
3.1
|
LYS50:D.NZ/1
|
|
A1:X.N3/1
|
3.34
|
THR14:L.OG1/1
|
|
G2:X.O2'/1
|
2.85
|
TYR12:L.O/1
|
|
A5:X.OP1/1
|
2.75
|
ARG28:L.N/1
|
|
|
Hbonds:
Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
Protein atom is atom of protein in Jmol/RasMol format.
Dist is distance from nucleic atom to protein atom in angstroms (Å).
W-Bridges:
W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
Protein atom is atom of protein in Jmol/RasMol format.
Water is water molecule.
d_n2w is distance from nucleic atom to water molecule (Å).
d_p2w is distance from protein atom to water molecule (Å).
CluD:
CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
Core number is serial number of cluster.
Atoms is number of detected atoms in the cluster.
