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Nucleic atom dist Protein atom
DC5:T.OP1/1 2.5 TYR39:A.OH/1
DC5:T.OP1/1 2.79 TYR39:A.OH/1
DC5:T.OP2/1 2.86 ASN324:A.N/1
DT6:T.OP1/1 2.86 ARG93:A.NH1/1
DT6:T.OP2/1 2.64 LYS86:A.NZ/1
DT6:T.OP2/1 3.13 SER322:A.N/1
DT6:T.O3'/1 3.17 ARG93:A.NH1/1
DC7:T.OP1/1 3.07 ARG93:A.NE/1
DC7:T.OP1/1 3.28 ARG351:A.NH2/1
DC7:T.OP2/1 3.06 GLY320:A.N/1
DA8:T.OP1/1 2.46 LYS317:A.N/1
DA8:T.OP2/1 2.75 THR318:A.OG1/1
DC9:T.OP1/1 3.2 ARG313:A.NH2/1
DA10:T.OP1/1 3.37 LYS293:A.NZ/1
DT3:P.OP2/1 3.27 ARG382:A.N/1
DT5:P.OP1/1 3.08 LYS261:A.NZ/1
DG6:P.OP1/1 2.93 LEU262:A.N/1
DG6:P.OP2/1 2.76 LYS261:A.N/1
DA7:P.OP1/1 2.79 SER257:A.N/1
DA7:P.OP1/1 3.05 GLY259:A.N/1
DG8:P.OP1/1 2.94 LYS224:A.NZ/1
DG8:P.OP1/1 2.05 ARG256:A.NH2/1
DG8:P.OP1/1 2.82 LYS224:A.NZ/1
DG8:P.OP2/1 2.2 LYS224:A.NZ/1
DG8:P.O3'/1 3.13 SER113:A.OG/1
DG8:P.O3'/1 2.88 ASP115:A.OD1/1
DG8:P.O3'/1 2.81 GLU116:A.OE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC5:T.OP1/1 2.73 107:T/1 2.83 SER322:A.O/1
DC5:T.OP1/1 2.72 944:A/1 2.76 LYS323:A.NZ/1
DC5:T.OP1/1 2.72 944:A/1 2.85 ASN324:A.O/1
DC5:T.OP2/1 2.7 102:T/1 2.97 SER322:A.OG/1
DC5:T.OP2/1 2.7 102:T/1 2.71 SER322:A.OG/1
DC5:T.O4'/1 2.77 654:A/1 2.49 GLN38:A.OE1/1
DT6:T.OP1/1 2.69 101:T/1 2.99 LEU89:A.N/1
DT6:T.OP1/1 2.69 101:T/1 3.01 ARG93:A.NH2/1
DT6:T.OP1/1 2.69 101:T/1 2.76 GLU347:A.OE2/1
DC7:T.OP1/1 2.89 923:A/1 2.86 ARG111:A.NH2/1
DC7:T.OP1/1 2.69 932:A/1 3.04 THR318:A.O/1
DC7:T.OP1/1 2.69 932:A/1 2.55 ARG351:A.NH2/1
DA8:T.OP1/1 2.81 934:A/1 2.51 ARG313:A.NH2/1
DG6:P.OP1/1 2.88 605:A/1 2.85 SER257:A.O/1
DG6:P.OP1/1 2.88 605:A/1 2.82 GLY260:A.N/1
DG6:P.OP1/1 2.88 605:A/1 3.18 GLY263:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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