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Nucleic atom dist Protein atom
DA2:D.OP1/1 3.15 GLY218:A.N/1
DA2:D.OP1/1 2.77 VAL221:A.N/1
DA2:D.OP2/1 3.19 LYS220:A.N/1
DA3:D.OP1/1 2.86 CYS216:A.N/1
DT5:T.OP1/1 2.9 HIS466:A.NE2/1
DT5:T.O3'/1 3.07 ARG193:A.NH1/1
DG6:T.OP2/1 2.78 ARG458:A.NH1/1
DG6:T.O6/1 2.9 ARG454:A.NE/1
DC7:T.OP2/1 3 THR465:A.OG1/1
DA3:U.OP1/1 3.05 GLY259:A.N/1
DA3:U.OP1/1 3.06 THR262:A.N/1
DA3:U.OP1/1 2.79 THR262:A.OG1/1
DA3:U.OP2/1 3.39 LYS261:A.N/1
DA4:U.OP1/1 2.8 GLY257:A.N/1
DC5:U.OP1/1 2.96 ASP343:A.OD2/1
DC5:U.OP1/1 2.95 ARG432:A.NH2/1
DC5:U.OP1/1 2.87 ASP434:A.OD2/1
DC5:U.O5'/1 3.24 ASP434:A.OD2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC7:T.OP1/1 2.73 101:T/1 3 ARG461:A.O/1
DC7:T.OP1/1 2.73 101:T/1 2.79 LEU472:A.N/1
DC5:U.O5'/1 2.68 101:U/1 2.92 ASP434:A.OD2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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