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Nucleic atom dist Protein atom
DA6:T.N3/1 2.99 ARG283:A.NH1/1
DG7:T.OP1/1 2.63 THR292:A.OG1/1
DC8:T.OP1/1 3.01 ASN294:A.ND2/1
DG9:T.OP1/1 2.55 TYR296:A.OH/1
DG9:T.N3/1 3.02 LYS234:A.NZ/1
DC10:T.OP1/1 2.97 THR233:A.N/1
DC10:T.OP1/1 2.95 LYS234:A.N/1
DA11:T.OP1/1 3.01 LYS230:A.N/1
DC8:P.OP1/1 3.1 GLY107:A.N/1
DC8:P.OP1/1 2.8 ALA110:A.N/1
DC8:P.OP2/1 2.92 SER109:A.N/1
DG9:P.OP1/1 2.6 GLY105:A.N/1
DC10:P.OP1/1 2.99 ARG254:A.NH2/1
DC10:P.O3'/1 2.88 ASP256:A.OD2/1
DC10:P.O2/1 2.89 TYR271:A.OH/1
DG1:D.OP1/1 2.76 LYS68:A.NZ/1
DT2:D.OP1/1 2.64 GLY66:A.N/1
DT2:D.OP1/1 2.98 ILE69:A.N/1
DT2:D.OP2/1 3.16 LYS68:A.N/1
DC3:D.OP1/1 2.74 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA6:T.N7/1 2.72 121:T/1 3.5 LYS280:A.NZ/1
DG7:T.OP1/1 2.73 103:T/1 2.85 ARG283:A.O/1
DG7:T.OP1/1 2.73 103:T/1 3.05 ILE293:A.N/1
DG7:T.N2/1 2.82 549:A/1 2.73 GLU295:A.OE2/1
DG7:T.N3/1 2.91 509:A/1 2.97 ARG283:A.NH1/1
DG7:T.N3/1 2.91 509:A/1 2.55 GLU295:A.OE1/1
DG9:T.N2/1 3.16 824:A/1 2.98 SER229:A.OG/1
DG9:T.N2/1 3.16 824:A/1 2.92 LYS234:A.NZ/1
DC10:T.OP2/1 2.77 105:T/1 3.01 GLU232:A.N/1
DA11:T.OP1/1 2.99 811:A/1 2.92 LYS230:A.O/1
DA11:T.OP2/1 2.86 131:T/1 2.92 LYS230:A.O/1
DT12:T.OP1/1 2.56 108:T/1 2.81 HIS134:A.N/1
DT12:T.OP1/1 2.86 101:T/1 2.99 HIS135:A.N/1
DG7:P.OP1/1 2.68 118:P/1 3.25 GLN31:A.NE2/1
DG9:P.OP2/1 2.82 753:A/1 2.76 LYS27:A.NZ/1
DG9:P.OP2/1 2.58 102:P/1 3.17 THR101:A.O/1
DG9:P.N3/1 2.66 103:P/1 2.93 LYS234:A.NZ/1
DC10:P.OP1/1 2.61 520:A/1 2.82 ASP190:A.OD2/1
DC10:P.OP1/1 2.83 587:A/1 2.76 ASP190:A.OD2/1
DC10:P.O4'/1 2.66 103:P/1 2.93 LYS234:A.NZ/1
DC3:D.OP2/1 2.65 825:A/1 3.18 LYS60:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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