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Nucleic atom dist Protein atom
DG1:D.OP1/1 3.01 LYS68:A.NZ/1
DG1:D.OP2/1 3.32 LYS68:A.NZ/1
DT2:D.OP1/1 2.78 GLY66:A.N/1
DT2:D.OP1/1 3.01 ILE69:A.N/1
DT2:D.OP2/1 3.22 LYS68:A.N/1
DC3:D.OP1/1 2.88 GLY64:A.N/1
DC8:P.OP1/1 2.94 GLY107:A.N/1
DC8:P.OP1/1 2.82 ALA110:A.N/1
DC8:P.OP2/1 3.09 SER109:A.N/1
DG9:P.OP1/1 2.72 GLY105:A.N/1
DC10:P.OP1/1 3.07 ARG254:A.NH2/1
DC10:P.O3'/1 2.9 ASP192:A.OD1/1
DC10:P.O3'/1 3.08 ASP256:A.OD2/1
DC10:P.O2/1 2.55 TYR271:A.OH/1
DG7:T.OP1/1 2.66 THR292:A.OG1/1
DC8:T.OP1/1 3 ASN294:A.ND2/1
DG9:T.OP1/1 2.68 TYR296:A.OH/1
DC10:T.OP1/1 2.98 THR233:A.N/1
DC10:T.OP1/1 2.84 LYS234:A.N/1
DA11:T.OP1/1 3.24 LYS230:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG1:D.OP1/1 2.75 598:A/1 2.7 TYR39:A.OH/1
DG1:D.OP1/1 2.75 598:A/1 2.83 LYS72:A.NZ/1
DG9:P.OP2/1 2.56 102:P/1 3.07 THR101:A.O/1
DG9:P.OP2/1 2.56 102:P/1 3.1 ILE106:A.O/1
DG9:P.N3/1 2.98 534:A/1 2.6 LYS234:A.NZ/1
DC10:P.OP1/1 2.94 595:A/1 3.09 SER104:A.OG/1
DC10:P.OP1/1 2.58 101:P/1 2.8 ASP190:A.OD2/1
DC10:P.OP1/1 2.94 595:A/1 2.84 ARG254:A.NE/1
DC10:P.O4'/1 2.91 534:A/1 2.6 LYS234:A.NZ/1
DG7:T.OP1/1 2.72 101:T/1 2.93 ARG283:A.O/1
DG7:T.OP1/1 2.72 101:T/1 2.92 ILE293:A.N/1
DG7:T.N2/1 3.46 541:A/1 2.79 GLU295:A.OE2/1
DG7:T.N3/1 3.28 540:A/1 2.84 ARG283:A.NH1/1
DG7:T.N3/1 3.28 540:A/1 2.9 ARG283:A.NH2/1
DG7:T.N3/1 3.28 540:A/1 2.47 GLU295:A.OE1/1
DC8:T.O2/1 3 541:A/1 2.79 GLU295:A.OE2/1
DG9:T.N2/1 3 602:A/1 2.81 SER229:A.OG/1
DG9:T.N2/1 3 602:A/1 2.93 LYS234:A.NZ/1
DC10:T.OP2/1 3.16 529:A/1 2.92 GLU232:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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