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Nucleic atom dist Protein atom
DT5:B.OP1/1 2.93 SER166:A.OG/1
DT5:B.OP1/1 3.02 ARG168:A.NH2/1
DT5:B.OP2/1 2.65 LEU167:A.N/1
DG6:B.OP2/1 2.65 THR150:A.OG1/1
DG6:B.O6/1 2.66 ARG124:A.NH1/1
DC8:B.N4/1 2.95 ASP154:A.OD1/1
DC8:B.N4/1 3.29 ASP154:A.OD2/1
DG10:B.N7/1 2.92 ARG157:A.NH1/1
DG10:B.O6/1 2.71 ARG157:A.NH2/1
DA13:B.OP1/1 2.93 LYS43:A.NZ/1
DA14:B.OP1/1 3.02 ASP21:A.OD2/1
DA14:B.OP2/1 3.04 LYS43:A.N/1
DA14:B.N7/1 2.52 THR76:A.OG1/1
DA14:B.N6/1 2.92 THR76:A.OG1/1
DG15:B.OP2/1 3.04 GLY20:A.O/1
DG15:B.N7/1 2.83 ARG77:A.NE/1
DG15:B.O6/1 3.2 ARG77:A.NE/1
DT16:B.OP2/1 2.74 TYR25:A.OH/1
DC18:B.N4/1 3.3 TYR29:A.OH/1
DC18:B.N4/1 3.05 ARG37:A.NH2/1
DG21:B.N7/1 3.48 ARG33:A.NH1/1
DG21:B.O6/1 2.66 ARG33:A.NH1/1
DC3:C.OP2/1 2.76 ASN32:A.ND2/1
DG4:C.OP1/1 2.48 LYS85:A.NZ/1
DG4:C.OP2/1 2.8 SER34:A.OG/1
DG4:C.OP2/1 2.84 TYR36:A.OH/1
DG4:C.N7/1 3.36 SER34:A.N/1
DC5:C.OP2/1 2.79 LYS85:A.N/1
DC5:C.N4/1 2.89 SER34:A.O/1
DC6:C.OP1/1 2.66 LYS68:A.N/1
DC6:C.N4/1 3.03 GLU35:A.OE1/1
DG7:C.OP1/1 2.33 LYS68:A.NZ/1
DG8:C.N7/1 3.04 ARG81:A.NH1/1
DG8:C.N7/1 2.99 ARG81:A.NH2/1
DG8:C.O6/1 2.68 ARG37:A.NH1/1
DG8:C.O6/1 2.76 ARG37:A.NH2/1
DA9:C.N6/1 3.22 ARG81:A.NH2/1
DA14:C.OP2/1 3.11 LYS130:A.NZ/1
DC15:C.OP1/1 2.85 GLU117:A.OE2/1
DC15:C.OP1/1 3.16 ASN129:A.ND2/1
DC15:C.OP2/1 2.6 LYS130:A.N/1
DC15:C.N4/1 3.04 ASP155:A.OD2/1
DC15:C.N4/1 3.28 ARG157:A.NH2/1
DC16:C.OP2/1 2.76 ALA116:A.O/1
DC17:C.OP2/1 2.68 LYS120:A.N/1
DG18:C.N7/1 2.77 ARG126:A.NH2/1
DG18:C.O6/1 2.72 ARG126:A.NH1/1
DG19:C.O6/1 2.36 ARG124:A.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA14:B.OP1/1 2.97 2004:A/1 2.69 GLN42:A.OE1/1
DA14:B.OP1/1 2.97 2004:A/1 2.78 VAL115:A.O/1
DA14:B.OP1/1 2.97 2004:A/1 2.89 LYS120:A.NZ/1
DA14:B.O3'/1 2.61 2003:A/1 2.27 GLU117:A.OE1/1
DG15:B.OP2/1 2.24 2003:A/1 2.18 ASP21:A.OD1/1
DG15:B.OP2/1 2.24 2003:A/1 2.27 GLU117:A.OE1/1
DT17:B.O4/1 2.6 2009:A/1 2.6 ARG37:A.NH1/1
DT17:B.O4/1 2.6 2009:A/1 3.08 GLU79:A.OE2/1
DC6:C.OP1/1 2.98 2011:A/1 2.64 LYS68:A.O/1
DC6:C.OP1/1 2.98 2011:A/1 3.19 GLN70:A.NE2/1
DC6:C.OP1/1 2.98 2011:A/1 2.63 SER83:A.N/1
DG7:C.N7/1 2.81 2008:A/1 2.89 GLU35:A.OE2/1
DG7:C.N7/1 2.81 2008:A/1 2.89 GLN70:A.NE2/1
DG7:C.N7/1 2.81 2008:A/1 2.81 ARG81:A.NH1/1
DC16:C.OP2/1 2.37 2003:A/1 2.18 ASP21:A.OD1/1
DC16:C.OP2/1 2.37 2003:A/1 2.27 GLU117:A.OE1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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